Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 CHMP1B2P-201ENST00000399581 597 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 HSPD1P16-201ENST00000402302 394 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 RPL26P37-201ENST00000411983 438 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC105402.1-201ENST00000413336 545 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL121916.1-201ENST00000429405 308 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 SDHCP3-201ENST00000445371 506 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 CDC27P1-201ENST00000445384 715 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL354714.5-201ENST00000450131 590 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC055733.3-201ENST00000505214 523 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC091965.2-201ENST00000512324 613 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 MTCYBP19-201ENST00000517463 1124 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 RN7SL32P-201ENST00000580514 281 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL645933.2-201ENST00000606743 1207 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC138749.5-201ENST00000611461 208 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC105227.2-201ENST00000615075 605 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC140479.4-205ENST00000636339 820 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC244258.1-201ENST00000637553 1071 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 HYDIN2-203ENST00000614586 13885 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 RNU6-31P-201ENST00000384388 108 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 RNU6-549P-201ENST00000384433 107 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 MT-TH-201ENST00000387441 69 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AL359715.1-201ENST00000404330 555 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 RNU4-74P-201ENST00000411280 161 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 OR8G2P-201ENST00000412796 908 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC007365.2-201ENST00000428806 458 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 GTF2IP7-202ENST00000436677 309 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 RNU6-956P-201ENST00000458868 103 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC008868.1-201ENST00000509786 737 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 NPM1P21-201ENST00000513394 762 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTN3Q9P232 OR8G3P-201ENST00000533406 921 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 UBE2NP1-201ENST00000545592 458 ntBASIC7.6□□□□□ -1.19
CNTN3Q9P232 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms