Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 RNU6-233P-201ENST00000410845 141 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 RN7SKP286-201ENST00000410894 299 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC245060.4-201ENST00000413293 1121 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AL096829.1-201ENST00000413677 457 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC013268.2-201ENST00000420753 337 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AL512637.1-201ENST00000439523 1231 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 REG1CP-206ENST00000447469 496 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AL445466.1-201ENST00000448432 357 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC092967.1-201ENST00000449016 481 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC023141.9-201ENST00000458734 412 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 RN7SL177P-201ENST00000476596 299 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC114728.1-201ENST00000488289 483 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC112191.2-201ENST00000522428 333 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AP000648.1-201ENST00000529682 397 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AL031601.1-201ENST00000605702 394 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 OR7A1P-202ENST00000641542 1158 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 RARSP1-201ENST00000542842 1418 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 AC093909.5-201ENST00000621839 1799 ntBASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF3Q9HD45 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 NAMPTP1-201ENST00000440465 2514 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AL445213.1-201ENST00000412589 747 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 RPS26P38-201ENST00000414476 348 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC064862.4-201ENST00000442180 334 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 OR13K1P-201ENST00000444577 975 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AL022237.1-201ENST00000446663 358 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 NPM1P19-201ENST00000450070 712 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 SLC25A51P1-201ENST00000468432 871 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AL122020.1-201ENST00000472287 459 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 ASNSP4-201ENST00000511103 447 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 RPL7L1P4-201ENST00000513004 707 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 MIR4776-2-201ENST00000580204 80 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC027229.1-201ENST00000583887 253 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 COX6CP7-201ENST00000597056 208 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms