Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 IGKV3D-25-201ENST00000519599 235 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 FAM27E2-201ENST00000619668 403 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 OR11H2-202ENST00000641517 1085 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 AC079776.5-201ENST00000641920 211 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 ZNF402P-201ENST00000404435 3100 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 LYARP1-201ENST00000436977 1501 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 GNL2P1-201ENST00000451274 2190 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 RN7SKP128-201ENST00000364270 303 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 U3.10-201ENST00000364459 214 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 RNA5SP178-201ENST00000410380 128 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AL354890.1-201ENST00000413730 346 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 RPS14P4-201ENST00000415880 418 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 RPS4XP5-201ENST00000419038 768 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 HNRNPA1P18-201ENST00000433537 927 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 RSU1P1-201ENST00000453416 441 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 AC026348.1-201ENST00000462549 1053 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AL157777.1-201ENST00000468100 304 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 LSM3P4-201ENST00000502948 309 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 AP003080.1-202ENST00000526526 915 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 MIR4420-201ENST00000583944 77 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 AC005899.7-201ENST00000618199 588 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AL136228.1-201ENST00000622221 319 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AC129778.1-202ENST00000623812 261 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AL591379.1-207ENST00000635982 261 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 AMYH02020865.1-205ENST00000636189 261 ntBASIC7□□□□□ -1.29
UPF3BQ9BZI7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7□□□□□ -1.29
UPF3BQ9BZI7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7□□□□□ -1.29
UPF3BQ9BZI7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 CR788268.1-201ENST00000603931 1809 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 MFSD8-239ENST00000641590 2479 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 SELENOWP1-201ENST00000322792 252 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 SNORA51.9-201ENST00000384295 124 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 CDY17P-201ENST00000414121 1282 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 RPL6P30-201ENST00000443382 862 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC096708.4-201ENST00000620563 552 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC063952.1-203ENST00000634410 658 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC000095.2-202ENST00000637415 154 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AC053481.2-202ENST00000582394 1500 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 RBPJP7-201ENST00000442803 1447 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 RBPJP5-201ENST00000449433 1447 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 FBXL21-201ENST00000297158 1305 ntBASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
UPF3BQ9BZI7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC012254.3-201ENST00000591183 2117 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms