Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC008507.3-201ENST00000585753 472 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AC245014.3-201ENST00000618589 347 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AC012254.3-201ENST00000591183 2117 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AC022034.1-201ENST00000512867 2156 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AC144833.1-201ENST00000567953 4089 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 RNU1-134P-201ENST00000362935 165 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 SNORD65-201ENST00000391079 73 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 RNU4-64P-201ENST00000410795 131 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 RNA5SP115-201ENST00000411160 107 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 HMGA1P8-201ENST00000414130 321 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 SNORA70.17-201ENST00000516449 133 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 SEC11B-201ENST00000518383 499 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 FAM106CP-201ENST00000582212 507 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AC008555.7-201ENST00000605008 583 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AC015722.2-201ENST00000622210 551 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AC129778.1-202ENST00000623812 261 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AL591379.1-207ENST00000635982 261 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4AQ9BY43 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 RNU4-23P-201ENST00000362839 140 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AL353626.3-201ENST00000413399 657 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 SETP10-201ENST00000424368 814 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 TPTE2P1-204ENST00000435256 593 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC002553.2-201ENST00000453217 340 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 Z83838.1-202ENST00000456225 839 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC023194.2-201ENST00000465398 406 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 CR383658.1-201ENST00000514609 734 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC007346.1-201ENST00000569208 867 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 MIR3189-201ENST00000578735 73 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC090236.2-201ENST00000587933 1101 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 QRSL1P1-201ENST00000400977 1540 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 AC019072.1-201ENST00000604535 1551 ntBASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4AQ9BY43 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms