Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC087894.3-201ENST00000623682 349 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC021106.3-201ENST00000623925 531 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC010325.3-201ENST00000641084 394 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 EIF4BP5-201ENST00000567338 1795 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC078880.4-201ENST00000617627 1749 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 RPS27-202ENST00000392558 625 ntTSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 MIR1178-201ENST00000408396 91 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 RNU4-61P-201ENST00000411243 107 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 BCRP8-201ENST00000412037 255 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL513185.2-201ENST00000425543 193 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL009174.1-201ENST00000426577 416 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 MTCO1P45-201ENST00000431457 267 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL590682.1-201ENST00000437248 344 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL450263.2-201ENST00000439400 589 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 Z98949.2-201ENST00000440996 144 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC245517.2-201ENST00000442890 346 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 SUMO1P2-201ENST00000452524 304 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC072039.1-201ENST00000477611 581 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 FAM172BP-201ENST00000487497 1089 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 RN7SL37P-201ENST00000490461 307 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC073358.1-201ENST00000505671 684 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC008629.3-201ENST00000505786 586 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC087360.1-201ENST00000518788 616 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AF235103.2-201ENST00000525753 346 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 NANOGNBP2-201ENST00000544753 553 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC010547.6-201ENST00000571789 193 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC006116.10-201ENST00000591836 581 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 OR7E18P-201ENST00000592589 702 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC010385.2-201ENST00000603743 490 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC106028.5-201ENST00000610332 395 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 AL353763.1-201ENST00000624467 1628 ntBASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
COL25A1Q9BXS0 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms