Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC7.45□□□□□ -1.22
ABCA3Q99758 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AL672138.1-201ENST00000450604 1015 ntBASIC7.45□□□□□ -1.22
ABCA3Q99758 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.45□□□□□ -1.22
ABCA3Q99758 AC002090.1-201ENST00000625000 2138 ntBASIC7.45□□□□□ -1.22
ABCA3Q99758 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
ABCA3Q99758 PWAR1-201ENST00000624188 2414 ntBASIC7.45□□□□□ -1.22
ABCA3Q99758 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 ZNF733P-202ENST00000444809 1573 ntBASIC7.45□□□□□ -1.22
ABCA3Q99758 OR55B1P-203ENST00000641518 2602 ntBASIC7.45□□□□□ -1.22
ABCA3Q99758 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
ABCA3Q99758 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ABCA3Q99758 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ABCA3Q99758 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ABCA3Q99758 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 RN7SKP113-201ENST00000363891 295 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 AC007161.1-204ENST00000423039 460 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 AL731534.1-201ENST00000434711 269 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 AC009220.1-201ENST00000451614 275 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 PRELID3BP5-201ENST00000508612 460 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 BNIP3P1-201ENST00000547295 580 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 AC087283.1-201ENST00000604029 1074 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 HSPA8P14-201ENST00000552265 1805 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ABCA3Q99758 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
ABCA3Q99758 AC006213.6-201ENST00000623722 4179 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
ABCA3Q99758 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.44□□□□□ -1.22
ABCA3Q99758 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.44□□□□□ -1.22
ABCA3Q99758 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 AC126755.2-208ENST00000327792 462 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 AC138969.1-213ENST00000331436 462 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.44□□□□□ -1.22
ABCA3Q99758 TEX41-205ENST00000431734 529 ntTSL 4 BASIC7.44□□□□□ -1.22
ABCA3Q99758 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.44□□□□□ -1.22
ABCA3Q99758 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.44□□□□□ -1.22
ABCA3Q99758 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.44□□□□□ -1.22
ABCA3Q99758 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.44□□□□□ -1.22
ABCA3Q99758 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.44□□□□□ -1.22
ABCA3Q99758 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.44□□□□□ -1.22
ABCA3Q99758 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.44□□□□□ -1.22
ABCA3Q99758 MAPK10-350ENST00000641777 965 ntBASIC7.44□□□□□ -1.22
ABCA3Q99758 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ABCA3Q99758 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.43□□□□□ -1.22
ABCA3Q99758 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
ABCA3Q99758 AL391262.1-201ENST00000556558 1992 ntBASIC7.43□□□□□ -1.22
ABCA3Q99758 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ABCA3Q99758 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ABCA3Q99758 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
ABCA3Q99758 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.43□□□□□ -1.22
ABCA3Q99758 RNA5SP505-201ENST00000364748 108 ntBASIC7.43□□□□□ -1.22
ABCA3Q99758 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.43□□□□□ -1.22
ABCA3Q99758 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.43□□□□□ -1.22
ABCA3Q99758 AC006466.1-201ENST00000438721 289 ntBASIC7.43□□□□□ -1.22
ABCA3Q99758 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.43□□□□□ -1.22
ABCA3Q99758 EIF3KP3-201ENST00000514461 639 ntBASIC7.43□□□□□ -1.22
ABCA3Q99758 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.43□□□□□ -1.22
ABCA3Q99758 AL512310.9-201ENST00000553311 948 ntBASIC7.43□□□□□ -1.22
ABCA3Q99758 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.43□□□□□ -1.22
ABCA3Q99758 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.43□□□□□ -1.22
ABCA3Q99758 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ABCA3Q99758 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ABCA3Q99758 INTS6P1-201ENST00000504674 2530 ntBASIC7.43□□□□□ -1.22
ABCA3Q99758 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ABCA3Q99758 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
ABCA3Q99758 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ABCA3Q99758 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ABCA3Q99758 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.43□□□□□ -1.22
ABCA3Q99758 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
ABCA3Q99758 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 AL133243.4-201ENST00000623116 3109 ntBASIC7.42□□□□□ -1.22
ABCA3Q99758 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.42□□□□□ -1.22
ABCA3Q99758 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.42□□□□□ -1.22
ABCA3Q99758 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms