Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 SNORA17.1-201ENST00000362945 126 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 MIR541-201ENST00000401360 84 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC015983.1-201ENST00000441577 373 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC073264.2-201ENST00000448886 166 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC015720.2-201ENST00000567709 334 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 RPL23P2-201ENST00000320371 421 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC009127.1-201ENST00000467090 155 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC009704.2-201ENST00000618739 483 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 RNU4-4P-201ENST00000364588 130 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 RNA5SP505-201ENST00000364748 108 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 RPL7P11-201ENST00000437586 658 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC090638.1-201ENST00000498296 909 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AP002373.2-201ENST00000541631 1060 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 MIR4480-201ENST00000582492 71 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC234771.5-201ENST00000600161 514 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC068790.4-201ENST00000602474 263 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AL162431.4-201ENST00000604674 411 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AC024255.1-201ENST00000614376 102 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 SAMMSON-209ENST00000641222 1100 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 MAPK10-270ENST00000641102 3538 ntBASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
ALMS1Q8TCU4 INTS6P1-201ENST00000504674 2530 ntBASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AC092106.1-201ENST00000444291 373 ntBASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 RAB9BP1-201ENST00000519581 626 ntBASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AC127381.1-201ENST00000555979 939 ntBASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AC068790.7-201ENST00000602347 528 ntBASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AC145423.1-201ENST00000605712 336 ntBASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALMS1Q8TCU4 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 HSPA8P14-201ENST00000552265 1805 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC012519.1-201ENST00000424588 610 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 RN7SL354P-201ENST00000469282 294 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL449283.1-201ENST00000602631 3403 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 OR9K1P-202ENST00000641111 3217 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms