Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 OLMALINC-203ENST00000641087 3779 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 SNX18P3-202ENST00000565670 1750 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 RNA5SP132-201ENST00000364725 118 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AL050335.1-201ENST00000396909 869 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 RNU4-64P-201ENST00000410795 131 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 MTND4LP17-201ENST00000414607 293 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AL627308.1-201ENST00000435693 821 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC009237.1-201ENST00000442127 744 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AL445466.1-201ENST00000448432 357 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC138409.2-202ENST00000507274 458 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 OR7E10P-201ENST00000526420 991 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 PCNAP4-201ENST00000532690 730 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC104695.2-201ENST00000605056 775 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AL136131.3-201ENST00000607600 188 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC004948.1-201ENST00000609858 672 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC006924.1-201ENST00000610750 559 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 CFTRP2-201ENST00000634304 199 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 AC027088.4-201ENST00000611559 1947 ntBASIC6.65□□□□□ -1.34
HERC6Q8IVU3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
HERC6Q8IVU3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
HERC6Q8IVU3 AC090220.1-201ENST00000593078 1699 ntBASIC6.65□□□□□ -1.35
HERC6Q8IVU3 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MT-RNR1-201ENST00000389680 954 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 OR7E101P-201ENST00000400428 513 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 NPM1P38-201ENST00000403835 865 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 RPL34P3-201ENST00000421454 338 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AC007394.1-201ENST00000421941 531 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MGAT2P1-201ENST00000449718 797 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AL513343.1-201ENST00000451818 792 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MTND2P3-201ENST00000452458 470 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 TPRKBP1-201ENST00000456243 481 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 RANP2-201ENST00000456833 229 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 RN7SL799P-201ENST00000475891 298 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 RN7SL466P-201ENST00000497546 295 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AP001496.3-201ENST00000580230 913 ntBASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AC097467.4-201ENST00000605504 141 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms