Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LIN28AP2-201ENST00000445283 458 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 COX6CP12-201ENST00000446748 202 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MTND5P20-201ENST00000448677 143 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MRPS21P1-201ENST00000453850 223 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC019080.2-201ENST00000453859 394 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MTCO3P11-201ENST00000455103 774 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MTCO2P30-201ENST00000503662 364 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 IGBP1P5-201ENST00000507524 1000 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC025465.4-201ENST00000513422 638 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 Y_RNA.702-201ENST00000516843 96 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 DEFB108A-201ENST00000530110 222 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC068631.3-201ENST00000538831 225 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC004890.3-201ENST00000605566 1095 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AL139123.1-201ENST00000612008 430 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 RNVU1-19-201ENST00000613023 167 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC099654.5-201ENST00000636479 350 ntBASIC8.03□□□□□ -1.12
RNF135Q8IUD6 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RNF135Q8IUD6 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
RNF135Q8IUD6 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 ENSAP3-201ENST00000312710 333 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 Y_RNA.61-201ENST00000362835 102 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 RNU6-348P-201ENST00000384386 107 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 Z97055.1-201ENST00000419730 712 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 CYP4F34P-201ENST00000425951 481 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 DNAJC19P4-201ENST00000440115 345 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC064862.5-201ENST00000440618 334 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC004865.1-201ENST00000442276 1003 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 NANOGNBP1-201ENST00000448444 480 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 CALM1P2-201ENST00000452941 448 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 RFC5P1-201ENST00000454419 874 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 RN7SL251P-201ENST00000464175 297 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC087385.2-201ENST00000477729 498 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC084878.1-201ENST00000480555 648 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC104383.1-201ENST00000530297 370 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AP001804.2-201ENST00000533932 910 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 MIR4666A-201ENST00000580160 79 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL390816.3-201ENST00000604527 1066 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL049634.1-201ENST00000453770 1720 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 DDX18P6-201ENST00000450119 1997 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms