Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 RNU6-236P-201ENST00000363886 106 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 SNORA70.8-201ENST00000384231 136 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 MIR431-201ENST00000385266 114 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AL139098.1-201ENST00000407291 389 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 RNU4-74P-201ENST00000411280 161 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 BTF3P8-201ENST00000414577 526 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 PPIAP30-201ENST00000415473 519 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 UBTFL3-201ENST00000418934 1024 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC009480.2-201ENST00000422916 432 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 GSTA6P-201ENST00000424144 582 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 C1DP1-201ENST00000426049 402 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 BX119321.1-201ENST00000428912 797 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AL136981.1-203ENST00000451452 3844 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC023245.1-201ENST00000468501 517 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AL121769.1-201ENST00000469473 401 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC126615.1-201ENST00000470084 630 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 MTCYBP17-201ENST00000503579 789 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 FAM92A1P2-202ENST00000504766 877 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC091874.2-201ENST00000505889 720 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC112225.1-201ENST00000508230 297 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC093770.1-201ENST00000511559 571 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 UBE2CP4-201ENST00000561405 535 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC106734.1-201ENST00000568646 663 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 ISCA1P3-201ENST00000577104 373 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 RN7SL622P-201ENST00000585292 275 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AL356986.1-201ENST00000604085 341 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC019080.5-201ENST00000624891 757 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AL596275.2-203ENST00000641951 371 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AP000641.1-201ENST00000531988 1639 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 EPS15P1-202ENST00000459691 2071 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RPL10P16-201ENST00000325000 645 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RNU4-21P-201ENST00000362802 126 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC074375.1-201ENST00000372993 192 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RNU6-1055P-201ENST00000391085 107 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 SNORD115-47-201ENST00000391226 86 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL079341.1-201ENST00000404701 1207 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL512430.2-201ENST00000406786 339 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC138393.2-201ENST00000414742 246 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 C1DP2-201ENST00000418167 426 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 USP9YP18-201ENST00000425912 695 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms