Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RPS18P1-201ENST00000447840 458 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 RBMY2HP-201ENST00000457961 720 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 RPSAP51-201ENST00000497462 645 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 RPS26P24-201ENST00000497656 331 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.43□□□□□ -1.54
RFX4Q33E94 NPM1P21-201ENST00000513394 762 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC005632.2-201ENST00000564271 828 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC010487.1-201ENST00000594408 1172 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RFX4Q33E94 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC012078.1-201ENST00000405035 1646 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC099654.3-201ENST00000447087 1546 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 AC007938.2-201ENST00000604666 2634 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AL031595.2-201ENST00000624215 19071 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX4Q33E94 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RFX4Q33E94 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 RPL35AP31-201ENST00000418340 337 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 RPL12P12-201ENST00000424633 501 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX4Q33E94 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC016027.4-201ENST00000450866 277 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 RPL12P24-201ENST00000474907 486 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 MIR2117-201ENST00000516780 80 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 RNA5SP230-201ENST00000517039 122 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.42□□□□□ -1.54
RFX4Q33E94 BCAS2P1-201ENST00000528022 632 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 AC036111.2-201ENST00000533247 901 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.42□□□□□ -1.54
RFX4Q33E94 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC089999.3-201ENST00000622440 577 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 AC021766.1-201ENST00000624404 741 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 AC073488.6-201ENST00000632293 754 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 RPS2P45-201ENST00000469997 2057 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX4Q33E94 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 AC018717.1-201ENST00000457712 1505 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFX4Q33E94 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RFX4Q33E94 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.42□□□□□ -1.54
RFX4Q33E94 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
RFX4Q33E94 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AC119674.1-202ENST00000641333 1860 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 AC010266.2-201ENST00000564741 3255 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AC008079.2-201ENST00000623543 20396 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC092681.1-201ENST00000297369 291 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 U3.7-201ENST00000363668 216 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 RN7SKP78-201ENST00000364711 318 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 SNORA64.3-201ENST00000365647 134 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 ARMC4P1-201ENST00000438905 707 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 RPS10P18-201ENST00000442662 495 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AC245291.3-201ENST00000443400 292 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC234771.2-201ENST00000445718 597 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AL590004.3-202ENST00000445883 451 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms