Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL121835.1-201ENST00000404250 354 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 AL391361.1-201ENST00000405580 489 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 AC010740.1-201ENST00000417035 684 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.82□□□□□ -1.32
GABPAQ06546 NENFP1-201ENST00000419476 466 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 BX510359.3-201ENST00000422168 306 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.82□□□□□ -1.32
GABPAQ06546 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.82□□□□□ -1.32
GABPAQ06546 AL445687.2-201ENST00000458156 728 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 RPL7L1P4-201ENST00000513004 707 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
GABPAQ06546 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.82□□□□□ -1.32
GABPAQ06546 AC126615.2-201ENST00000553003 515 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.82□□□□□ -1.32
GABPAQ06546 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.82□□□□□ -1.32
GABPAQ06546 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.82□□□□□ -1.32
GABPAQ06546 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 AL662795.2-201ENST00000624252 3706 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
GABPAQ06546 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.82□□□□□ -1.32
GABPAQ06546 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 AC005224.3-201ENST00000584683 2140 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
GABPAQ06546 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
GABPAQ06546 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 FBXL21-201ENST00000297158 1305 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
GABPAQ06546 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
GABPAQ06546 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
GABPAQ06546 YES1P1-201ENST00000418510 1628 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
GABPAQ06546 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.81□□□□□ -1.32
GABPAQ06546 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.81□□□□□ -1.32
GABPAQ06546 AC019205.1-201ENST00000421830 730 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 AC096775.1-201ENST00000437724 448 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.81□□□□□ -1.32
GABPAQ06546 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.81□□□□□ -1.32
GABPAQ06546 AL355032.1-201ENST00000472981 438 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 RN7SL177P-201ENST00000476596 299 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 RN7SL570P-201ENST00000484405 292 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.81□□□□□ -1.32
GABPAQ06546 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.81□□□□□ -1.32
GABPAQ06546 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.81□□□□□ -1.32
GABPAQ06546 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.81□□□□□ -1.32
GABPAQ06546 TOMM22P4-201ENST00000511318 336 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.81□□□□□ -1.32
GABPAQ06546 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.81□□□□□ -1.32
GABPAQ06546 HSPE1P2-201ENST00000554777 306 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.81□□□□□ -1.32
GABPAQ06546 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 AL691477.1-201ENST00000624398 162 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 WBP11P1-201ENST00000562560 1931 ntBASIC6.81□□□□□ -1.32
GABPAQ06546 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.81□□□□□ -1.32
GABPAQ06546 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.81□□□□□ -1.32
GABPAQ06546 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
GABPAQ06546 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
GABPAQ06546 RN7SKP160-201ENST00000363804 340 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 OR3A2-201ENST00000408891 1076 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 Z68694.1-201ENST00000413929 841 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 OR6E1P-201ENST00000414424 923 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.8□□□□□ -1.32
GABPAQ06546 FMO7P-201ENST00000436045 768 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
GABPAQ06546 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.8□□□□□ -1.32
GABPAQ06546 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.8□□□□□ -1.32
GABPAQ06546 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.8□□□□□ -1.32
GABPAQ06546 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.8□□□□□ -1.32
GABPAQ06546 AC130360.2-201ENST00000533477 1556 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 AC090424.1-201ENST00000535243 736 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.8□□□□□ -1.32
GABPAQ06546 AC007346.2-201ENST00000564816 892 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 MIR4489-201ENST00000578869 62 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.8□□□□□ -1.32
GABPAQ06546 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
GABPAQ06546 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.8□□□□□ -1.32
GABPAQ06546 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.8□□□□□ -1.32
GABPAQ06546 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms