Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 WDR82P2-201ENST00000444540 928 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC012512.1-201ENST00000446594 718 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC099670.1-201ENST00000455141 783 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC137549.1-201ENST00000514243 533 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 RN7SKP196-201ENST00000516267 345 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40LGP29965 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40LGP29965 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.23□□□□□ -1.57
CD40LGP29965 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40LGP29965 RPS4XP21-201ENST00000603814 750 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 SNORD96A-201ENST00000606577 79 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AL137000.1-201ENST00000610528 1244 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC010632.3-201ENST00000611377 369 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 RN7SL261P-201ENST00000613441 282 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40LGP29965 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CD40LGP29965 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CD40LGP29965 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40LGP29965 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 AC010132.4-201ENST00000569883 1368 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CD40LGP29965 AC026310.1-201ENST00000396004 378 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 MIR1266-201ENST00000408125 84 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 RNU2-18P-201ENST00000411224 162 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 NPM1P40-201ENST00000412758 733 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40LGP29965 AC113412.1-201ENST00000425840 504 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40LGP29965 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40LGP29965 GAPDHP23-201ENST00000444823 993 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 AL034369.1-201ENST00000453808 477 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 RPL31P11-202ENST00000454082 372 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40LGP29965 RN7SL714P-201ENST00000487050 298 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 RPL5P33-201ENST00000487833 905 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 MTCO1P55-201ENST00000489829 745 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CD40LGP29965 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40LGP29965 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 OR4A17P-201ENST00000526032 904 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 NMNAT1P5-201ENST00000559657 841 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 AC027796.1-201ENST00000575593 512 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 MIR4472-2-201ENST00000582069 67 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40LGP29965 MIR3936-201ENST00000584304 110 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 MIR7853-201ENST00000584820 132 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 U91328.4-201ENST00000608919 517 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 BNIP3P41-202ENST00000616656 861 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40LGP29965 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40LGP29965 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40LGP29965 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 MTCO1P15-201ENST00000529569 1526 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 ABCC13-202ENST00000463099 3842 ntBASIC5.22□□□□□ -1.57
CD40LGP29965 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40LGP29965 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40LGP29965 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CD40LGP29965 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms