Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC069542.2-201ENST00000624816 216 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 MIR1910-201ENST00000636955 80 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
HLA-DQB2P05538 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-DQB2P05538 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 OR52B3P-201ENST00000314715 928 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 U3.10-201ENST00000364459 214 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 OR7E101P-201ENST00000400428 513 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC127526.2-201ENST00000426436 775 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 VN1R21P-201ENST00000426703 765 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 RPS23P6-201ENST00000466136 431 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 UBFD1P1-201ENST00000473259 814 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 RPL5P12-201ENST00000477071 851 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC073610.1-201ENST00000489971 396 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 NENFP3-201ENST00000503735 313 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 SNORA70.20-201ENST00000516848 126 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AP001357.1-201ENST00000586304 1053 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AL049840.6-201ENST00000604583 345 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AL035661.1-201ENST00000620459 1144 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC022400.9-201ENST00000623633 273 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 DNM1P47-203ENST00000571780 12667 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC091305.2-201ENST00000624049 1576 ntBASIC5.83□□□□□ -1.48
HLA-DQB2P05538 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DQB2P05538 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC097634.1-201ENST00000604491 2467 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 RPL11P3-201ENST00000395256 523 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 HMGN1P20-201ENST00000411849 300 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 METTL15P3-201ENST00000415522 1221 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AL138899.2-201ENST00000439139 499 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC074255.1-201ENST00000511259 501 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC027243.2-201ENST00000602530 724 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC007842.1-201ENST00000597336 2039 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AC138907.8-201ENST00000623981 2256 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 AP000547.3-204ENST00000588548 2523 ntBASIC5.82□□□□□ -1.48
HLA-DQB2P05538 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DQB2P05538 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms