Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 AC021678.3-201ENST00000517893 476 ntBASIC5.71□□□□□ -1.5
TNFP01375 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.71□□□□□ -1.5
TNFP01375 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFP01375 AC007346.2-201ENST00000564816 892 ntBASIC5.71□□□□□ -1.5
TNFP01375 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFP01375 AL589674.2-201ENST00000604304 337 ntBASIC5.71□□□□□ -1.5
TNFP01375 FAM72A-208ENST00000607379 1139 ntBASIC5.71□□□□□ -1.5
TNFP01375 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFP01375 MIR6886-201ENST00000619864 61 ntBASIC5.71□□□□□ -1.5
TNFP01375 AL390318.1-201ENST00000624564 687 ntBASIC5.71□□□□□ -1.5
TNFP01375 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFP01375 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TNFP01375 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TNFP01375 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFP01375 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFP01375 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TNFP01375 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TNFP01375 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFP01375 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TNFP01375 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 RMRPP5-201ENST00000411156 267 ntBASIC5.7□□□□□ -1.5
TNFP01375 AC015977.1-201ENST00000418887 292 ntBASIC5.7□□□□□ -1.5
TNFP01375 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.7□□□□□ -1.5
TNFP01375 EEF1B2P6-201ENST00000445713 673 ntBASIC5.7□□□□□ -1.5
TNFP01375 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFP01375 FRG2FP-204ENST00000453982 852 ntBASIC5.7□□□□□ -1.5
TNFP01375 RPS23P6-201ENST00000466136 431 ntBASIC5.7□□□□□ -1.5
TNFP01375 AL157777.1-201ENST00000468100 304 ntBASIC5.7□□□□□ -1.5
TNFP01375 AC138866.2-201ENST00000508650 584 ntBASIC5.7□□□□□ -1.5
TNFP01375 AC074087.1-201ENST00000512059 724 ntBASIC5.7□□□□□ -1.5
TNFP01375 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFP01375 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFP01375 AL049872.1-201ENST00000556323 322 ntBASIC5.7□□□□□ -1.5
TNFP01375 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFP01375 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFP01375 AC022919.1-201ENST00000624979 626 ntBASIC5.7□□□□□ -1.5
TNFP01375 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TNFP01375 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFP01375 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFP01375 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TNFP01375 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFP01375 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFP01375 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFP01375 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFP01375 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFP01375 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TNFP01375 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 BMS1P17-202ENST00000416720 316 ntBASIC5.69□□□□□ -1.5
TNFP01375 AC005297.1-201ENST00000444765 862 ntBASIC5.69□□□□□ -1.5
TNFP01375 AL355032.1-201ENST00000472981 438 ntBASIC5.69□□□□□ -1.5
TNFP01375 RPL32P33-201ENST00000487023 394 ntBASIC5.69□□□□□ -1.5
TNFP01375 AL035690.1-201ENST00000490892 383 ntBASIC5.69□□□□□ -1.5
TNFP01375 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC008429.4-201ENST00000521201 182 ntBASIC5.69□□□□□ -1.5
TNFP01375 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFP01375 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFP01375 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.69□□□□□ -1.5
TNFP01375 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.69□□□□□ -1.5
TNFP01375 AC104695.2-201ENST00000605056 775 ntBASIC5.69□□□□□ -1.5
TNFP01375 AC008115.3-201ENST00000614874 549 ntBASIC5.69□□□□□ -1.5
TNFP01375 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFP01375 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.69□□□□□ -1.5
TNFP01375 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.69□□□□□ -1.5
TNFP01375 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFP01375 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFP01375 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFP01375 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFP01375 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms