Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LDLRP01130 AC087516.1-201ENST00000561236 2428 ntBASIC5.89□□□□□ -1.47
LDLRP01130 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.89□□□□□ -1.47
LDLRP01130 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LDLRP01130 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 AC140134.1-201ENST00000511830 3544 ntBASIC5.88□□□□□ -1.47
LDLRP01130 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
LDLRP01130 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LDLRP01130 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.88□□□□□ -1.47
LDLRP01130 MTND3P20-201ENST00000407663 186 ntBASIC5.88□□□□□ -1.47
LDLRP01130 Z93019.1-201ENST00000416450 973 ntBASIC5.88□□□□□ -1.47
LDLRP01130 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 RPL7AP14-201ENST00000424041 802 ntBASIC5.88□□□□□ -1.47
LDLRP01130 OSTCP4-201ENST00000424397 449 ntBASIC5.88□□□□□ -1.47
LDLRP01130 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.88□□□□□ -1.47
LDLRP01130 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.88□□□□□ -1.47
LDLRP01130 RPL23AP19-201ENST00000436229 369 ntBASIC5.88□□□□□ -1.47
LDLRP01130 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AC010240.2-201ENST00000445363 1205 ntBASIC5.88□□□□□ -1.47
LDLRP01130 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.88□□□□□ -1.47
LDLRP01130 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.88□□□□□ -1.47
LDLRP01130 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.88□□□□□ -1.47
LDLRP01130 AC112187.1-201ENST00000455837 479 ntBASIC5.88□□□□□ -1.47
LDLRP01130 AC090589.1-201ENST00000473109 362 ntBASIC5.88□□□□□ -1.47
LDLRP01130 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
LDLRP01130 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.88□□□□□ -1.47
LDLRP01130 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.88□□□□□ -1.47
LDLRP01130 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.88□□□□□ -1.47
LDLRP01130 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.88□□□□□ -1.47
LDLRP01130 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.88□□□□□ -1.47
LDLRP01130 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AC005229.3-201ENST00000603438 323 ntBASIC5.88□□□□□ -1.47
LDLRP01130 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AC100767.2-201ENST00000604840 693 ntBASIC5.88□□□□□ -1.47
LDLRP01130 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 HDAC1P2-201ENST00000453661 1398 ntBASIC5.88□□□□□ -1.47
LDLRP01130 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.88□□□□□ -1.47
LDLRP01130 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
LDLRP01130 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
LDLRP01130 AL442128.2-201ENST00000620246 1824 ntBASIC5.88□□□□□ -1.47
LDLRP01130 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LDLRP01130 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 AP001541.1-201ENST00000623322 1904 ntBASIC5.87□□□□□ -1.47
LDLRP01130 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LDLRP01130 RPL21P50-201ENST00000417698 477 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 AC002127.1-201ENST00000421305 225 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.87□□□□□ -1.47
LDLRP01130 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.87□□□□□ -1.47
LDLRP01130 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.87□□□□□ -1.47
LDLRP01130 AC110749.1-201ENST00000462007 357 ntBASIC5.87□□□□□ -1.47
LDLRP01130 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.87□□□□□ -1.47
LDLRP01130 COX6B1P2-201ENST00000489624 230 ntBASIC5.87□□□□□ -1.47
LDLRP01130 GM2AP2-201ENST00000491764 562 ntBASIC5.87□□□□□ -1.47
LDLRP01130 MORF4L2P1-201ENST00000503761 858 ntBASIC5.87□□□□□ -1.47
LDLRP01130 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.87□□□□□ -1.47
LDLRP01130 HNRNPRP2-201ENST00000528421 743 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.87□□□□□ -1.47
LDLRP01130 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.87□□□□□ -1.47
LDLRP01130 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.87□□□□□ -1.47
LDLRP01130 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 AC008507.3-201ENST00000585753 472 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AP001357.1-201ENST00000586304 1053 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 286.8 ms