Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OR4A17P-201ENST00000526032 904 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC090424.1-201ENST00000535243 736 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 FRG2IP-201ENST00000563581 781 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR5192-201ENST00000579892 92 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL49P-201ENST00000581392 298 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR7853-201ENST00000584820 132 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC068768.2-201ENST00000602352 343 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL26P30-202ENST00000602923 645 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 DIMT1P1-201ENST00000603970 763 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 IMMP1LP3-201ENST00000604197 224 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 OR10AE1P-201ENST00000606962 1029 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AL023881.1-201ENST00000621088 301 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02471-203ENST00000641941 4752 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CHKB-CPT1BH3BT56 USP40-202ENST00000409945 1946 ntTSL 2 BASIC3.09□□□□□ -1.92
CHKB-CPT1BH3BT56 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC3.09□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CHKB-CPT1BH3BT56 MAPK10-303ENST00000641324 3959 ntBASIC3.09□□□□□ -1.92
CHKB-CPT1BH3BT56 NAMPTP1-201ENST00000440465 2514 ntBASIC3.09□□□□□ -1.92
CHKB-CPT1BH3BT56 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CHKB-CPT1BH3BT56 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 RNA5SP379-201ENST00000364599 113 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 NOX1-203ENST00000372964 661 ntTSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 RNA5SP241-201ENST00000391326 114 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL512430.2-201ENST00000406786 339 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 EIF4A1P3-201ENST00000411521 244 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC096921.1-201ENST00000411661 375 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL356273.2-201ENST00000413701 973 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC092570.3-201ENST00000420113 693 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 RPL23AP34-201ENST00000423483 410 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AF274573.1-201ENST00000430535 494 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC069285.2-201ENST00000440210 275 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL157385.1-201ENST00000446973 268 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 CCDC75P1-201ENST00000469247 791 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL031864.2-201ENST00000498507 350 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC080079.1-201ENST00000509326 1045 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 VWA8P1-201ENST00000510889 176 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SCARNA18.2-201ENST00000516882 84 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 IGHVII-51-2-201ENST00000519778 259 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AP001767.2-201ENST00000527291 382 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL121594.2-201ENST00000541658 472 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 RN7SL290P-201ENST00000578661 300 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms