Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TVP23AA6NH52 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TVP23AA6NH52 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TVP23AA6NH52 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TVP23AA6NH52 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TVP23AA6NH52 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TVP23AA6NH52 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TVP23AA6NH52 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TVP23AA6NH52 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 RNA5SP279-201ENST00000365513 117 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 U3.23-201ENST00000391132 200 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 METTL15P3-201ENST00000415522 1221 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 RPS4XP5-201ENST00000419038 768 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 Z82198.3-201ENST00000421145 199 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 AL139158.1-201ENST00000424719 340 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 VTI1BP4-201ENST00000427516 527 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 TRIM60P16-201ENST00000444048 694 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 AL445466.1-201ENST00000448432 357 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 KF459542.1-201ENST00000450908 553 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC006539.1-201ENST00000481419 501 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 AL158068.1-201ENST00000506116 616 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 OR4A42P-201ENST00000531397 938 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 BTG1P1-201ENST00000540396 508 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC126615.2-201ENST00000553003 515 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.21□□□□□ -1.58
TVP23AA6NH52 AC006115.2-201ENST00000596823 202 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 MFSD8-219ENST00000641228 2559 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TVP23AA6NH52 FBXL21-201ENST00000297158 1305 ntBASIC5.21□□□□□ -1.58
TVP23AA6NH52 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC008627.1-201ENST00000517511 1704 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TVP23AA6NH52 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TVP23AA6NH52 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 BX276092.6-201ENST00000430476 250 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC096775.1-201ENST00000437724 448 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC023141.8-201ENST00000442554 208 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 CEACAMP11-201ENST00000455211 583 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 BX276092.8-201ENST00000455722 250 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC004129.2-201ENST00000457229 287 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 RN7SL254P-201ENST00000460609 284 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 RN7SL269P-201ENST00000467795 305 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC026782.2-201ENST00000510845 636 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC068768.2-201ENST00000602352 343 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC005479.3-201ENST00000602790 431 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AL139041.1-201ENST00000605480 610 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC005828.7-201ENST00000607331 556 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 AC073389.3-201ENST00000609434 935 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 MIR6721-201ENST00000617181 87 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 FAM27E2-201ENST00000619668 403 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 OR11H2-202ENST00000641517 1085 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TVP23AA6NH52 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TVP23AA6NH52 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TVP23AA6NH52 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 RBPJP7-201ENST00000442803 1447 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 RBPJP5-201ENST00000449433 1447 ntBASIC5.2□□□□□ -1.58
TVP23AA6NH52 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.2□□□□□ -1.58
TVP23AA6NH52 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms