Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL391987.1-201ENST00000441025 200 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC124945.1-201ENST00000485133 188 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 SNORA70.20-201ENST00000516848 126 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AP003080.1-202ENST00000526526 915 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 HMGN2P36-201ENST00000529541 409 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 FAM27E4-201ENST00000605259 342 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC005899.7-201ENST00000618199 588 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 THAP12P9-201ENST00000503971 2360 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 TMSB4XP4-201ENST00000323496 618 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 RPS17P17-201ENST00000419392 409 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC016027.5-201ENST00000427227 210 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC126120.1-201ENST00000431082 470 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AL161636.2-201ENST00000445179 927 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AL162739.1-201ENST00000450606 307 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC093166.4-201ENST00000457867 318 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 RNF19BPY-201ENST00000458209 1550 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 RN7SL273P-201ENST00000481561 299 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 RN7SL101P-201ENST00000496350 279 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC008945.1-201ENST00000505144 499 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC105036.1-201ENST00000566222 271 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 TXNP4-201ENST00000575018 310 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 MIR132-201ENST00000591554 101 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AL137246.2-201ENST00000613439 662 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AL139099.4-201ENST00000614802 114 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 AC004656.1-201ENST00000568479 4951 ntBASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCF1Q9UBD9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 SAMMSON-210ENST00000641260 1308 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AP004289.1-201ENST00000436307 2205 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 RNA5SP514-201ENST00000363717 111 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 RN7SKP81-201ENST00000365603 331 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms