Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC244502.2-201ENST00000543361 851 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC010198.2-201ENST00000550612 259 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC011611.5-201ENST00000552477 578 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 NBEAP1-201ENST00000554452 979 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC013283.1-201ENST00000557282 492 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC136619.2-201ENST00000563361 631 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC093524.1-201ENST00000564266 1094 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC026458.1-201ENST00000564330 438 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC107982.3-201ENST00000584957 985 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AL031281.1-201ENST00000604049 488 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AC019257.2-201ENST00000605539 497 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AL359314.1-201ENST00000616913 261 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 AL034408.1-201ENST00000637712 664 ntBASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.65□□□□□ -1.02
CCDC85AQ96PX6 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CCDC85AQ96PX6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CCDC85AQ96PX6 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CCDC85AQ96PX6 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC023818.2-201ENST00000623817 2304 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 RNA5SP308-201ENST00000362532 115 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 RNA5SP172-201ENST00000365061 118 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 RNU6-413P-201ENST00000384115 107 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 RN7SKP146-201ENST00000410242 334 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 RN7SKP221-201ENST00000410420 301 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 UBTFL2-201ENST00000411859 1191 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 Z75741.2-201ENST00000417272 1167 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC098592.1-201ENST00000419352 333 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AHCYP8-201ENST00000425108 209 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 DPRXP1-201ENST00000426312 460 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 TPMTP4-201ENST00000450749 678 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AL109741.2-201ENST00000455561 343 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC026348.1-201ENST00000462549 1053 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC068724.1-201ENST00000487100 792 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC021087.2-201ENST00000504656 1203 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 CDC42P4-201ENST00000510507 563 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC092851.1-201ENST00000535964 478 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC012417.1-201ENST00000582307 1039 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC083760.1-201ENST00000589621 670 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC100767.2-201ENST00000604840 693 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC009237.15-201ENST00000610252 501 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 RBM12B-AS1-201ENST00000623283 653 ntBASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CCDC85AQ96PX6 AC004520.1-201ENST00000608362 1413 ntBASIC8.63□□□□□ -1.03
CCDC85AQ96PX6 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CCDC85AQ96PX6 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.63□□□□□ -1.03
CCDC85AQ96PX6 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms