Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 PPIAP24-201ENST00000328558 471 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 RNU6-1331P-201ENST00000363658 106 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AL050335.1-201ENST00000396909 869 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 AL590635.1-201ENST00000406314 586 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 Z68868.1-201ENST00000429048 544 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 GAPDHP33-201ENST00000443168 1013 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AL161722.1-201ENST00000446972 1032 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC113367.2-201ENST00000505749 160 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 CYCSP25-201ENST00000525280 316 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC027176.2-201ENST00000559166 746 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC079148.1-201ENST00000565944 819 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AL049840.5-201ENST00000602827 552 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 RNU6-84P-201ENST00000607737 102 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC068726.1-201ENST00000610993 341 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC012676.3-201ENST00000614983 479 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC010325.3-201ENST00000641084 394 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 AC062022.1-201ENST00000451026 1684 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 HSPA8P19-201ENST00000505359 1517 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 NAMPTP1-201ENST00000440465 2514 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC110792.3-201ENST00000595906 1614 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 MTHFD2P5-201ENST00000320415 844 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC009506.2-201ENST00000420635 840 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC019205.1-201ENST00000421830 730 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 SFR1P2-201ENST00000421841 730 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC073310.1-201ENST00000423226 1033 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AL139158.1-201ENST00000424719 340 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 MTCYBP32-201ENST00000427945 1084 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 RPL5P2-201ENST00000429598 854 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 CCNJP2-201ENST00000457810 1163 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 MARK2P8-201ENST00000476069 952 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC105420.1-201ENST00000504389 582 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC026782.2-201ENST00000510845 636 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC009879.1-201ENST00000520029 839 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC007494.1-201ENST00000562293 760 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms