Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 RN7SKP77-201ENST00000363261 353 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 RNA5SP510-201ENST00000364697 99 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 MIR1203-201ENST00000408812 85 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 RN7SKP166-201ENST00000410812 305 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 RPS7P3-201ENST00000443360 580 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AL445687.2-201ENST00000458156 728 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 snoU13.29-201ENST00000459370 104 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AL122020.1-201ENST00000472287 459 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 RPL23AP40-201ENST00000487630 390 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 UGT2A3P7-201ENST00000510485 734 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 IGKV2-4-201ENST00000523070 340 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 PCNAP4-201ENST00000532690 730 ntBASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FNDC9Q8TBE3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC015799.1-201ENST00000622996 3122 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 SAMMSON-210ENST00000641260 1308 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 RN7SKP128-201ENST00000364270 303 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 KIF4CP-201ENST00000422742 1279 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 BX323845.3-201ENST00000428215 527 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 KATNBL1P2-201ENST00000433311 835 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AL445928.1-201ENST00000435545 222 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 MIR132-201ENST00000591554 101 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC027243.2-201ENST00000602530 724 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AL031658.2-201ENST00000616850 651 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 AC005899.7-201ENST00000618199 588 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
FNDC9Q8TBE3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms