Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 PSMD8P1-201ENST00000436275 769 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC083855.1-201ENST00000440041 258 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 CASP3P1-201ENST00000446037 609 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC008379.1-201ENST00000463655 464 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC083806.1-201ENST00000468934 316 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 RPS17P11-201ENST00000474297 293 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 RPS4XP23-201ENST00000487801 237 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC147055.3-201ENST00000510547 851 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 FABP5P5-201ENST00000515537 406 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 RNU6-1153P-201ENST00000516760 105 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 EEF1B2P2-201ENST00000519625 676 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC123904.3-201ENST00000547218 814 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 ARGFXP2-201ENST00000579304 949 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 RPS4XP21-201ENST00000603814 750 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 DUXAP11-201ENST00000603858 526 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AL035410.2-201ENST00000604963 864 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC009994.1-201ENST00000606889 253 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 OGFOD1P1-201ENST00000447552 1592 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 FLJ42393-201ENST00000623801 2270 ntBASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.12□□□□□ -1.11
NEDD1Q8NHV4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 SNORA72.1-201ENST00000363485 129 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 SNORA70G-201ENST00000383923 142 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 RNU11-6P-201ENST00000391127 133 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL021331.1-201ENST00000402817 582 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL353133.1-201ENST00000407695 401 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 ATG4AP1-201ENST00000416893 538 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC093422.3-201ENST00000428506 305 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 NDUFS5P5-201ENST00000437256 321 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 DEFA11P-201ENST00000446470 261 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 PTENP1-201ENST00000447117 1215 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 MRPL35P4-201ENST00000453682 566 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 RPL31P53-201ENST00000457065 348 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 RPS12P31-201ENST00000491419 398 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC139272.1-201ENST00000505516 640 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC024589.1-201ENST00000512207 263 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC093878.1-201ENST00000515630 432 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC067904.2-201ENST00000517322 1283 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC113191.1-201ENST00000517759 403 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 OR4V1P-201ENST00000525394 1140 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 CENPUP1-201ENST00000526649 1202 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC020914.7-201ENST00000594477 545 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC111186.1-201ENST00000604684 130 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC135068.11-201ENST00000636378 921 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 AC020978.6-201ENST00000571197 3177 ntBASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEDD1Q8NHV4 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms