Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCS1Q01581 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCS1Q01581 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCS1Q01581 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 AL355834.1-201ENST00000556602 3965 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 CXADRP1-201ENST00000398098 1095 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 AL354890.1-201ENST00000413730 346 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC242426.1-201ENST00000435270 960 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC015983.1-201ENST00000441577 373 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 RPL6P30-201ENST00000443382 862 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 RBMY2AP-201ENST00000445405 1157 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 RBMY2CP-201ENST00000448575 1157 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 RBMY2DP-202ENST00000448881 1157 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 RBMY2BP-202ENST00000451071 1156 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 RNU1-88P-201ENST00000459274 128 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC092865.4-201ENST00000477936 615 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 PDCL3P4-201ENST00000489621 720 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 OR5D2P-201ENST00000524390 911 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC145423.1-201ENST00000605712 336 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 AP001437.1-201ENST00000608783 456 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 MIR6809-201ENST00000612189 116 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 CXADRP3-202ENST00000617265 1100 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 AC009120.7-201ENST00000623452 780 ntBASIC5.6□□□□□ -1.51
HMGCS1Q01581 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCS1Q01581 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC005077.1-201ENST00000449226 375 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 OR52E7P-201ENST00000452394 933 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 PRMT5P1-201ENST00000514351 598 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC136777.2-201ENST00000522979 358 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AL163952.1-202ENST00000569625 600 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC025857.2-201ENST00000602711 238 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC092266.1-201ENST00000610958 165 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 AL139099.4-201ENST00000614802 114 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC022400.9-201ENST00000623633 273 ntBASIC5.59□□□□□ -1.51
HMGCS1Q01581 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS1Q01581 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS1Q01581 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HMGCS1Q01581 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.59□□□□□ -1.52
HMGCS1Q01581 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.59□□□□□ -1.52
HMGCS1Q01581 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
HMGCS1Q01581 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.59□□□□□ -1.52
HMGCS1Q01581 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.59□□□□□ -1.52
HMGCS1Q01581 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
HMGCS1Q01581 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HMGCS1Q01581 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms