Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CX3CL1P78423 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 GNG5P2-201ENST00000372054 207 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 MIR191-201ENST00000384873 92 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 RPL10P10-201ENST00000403509 664 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 RPS26P4-201ENST00000431743 355 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC009237.1-201ENST00000442127 744 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 snoU13.29-201ENST00000459370 104 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC015864.1-201ENST00000496512 544 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 RN7SL612P-201ENST00000497704 295 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 AC093770.1-201ENST00000511559 571 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CL1P78423 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC009729.1-201ENST00000548873 1133 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC005332.4-201ENST00000592752 579 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC098483.2-201ENST00000603158 454 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 AC011891.2-201ENST00000604949 397 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC016542.1-201ENST00000608259 493 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 AC093388.1-201ENST00000609166 430 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 MIR6811-201ENST00000620409 58 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 MIR7159-201ENST00000620587 66 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 MIR6813-201ENST00000621638 56 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 OR7E91P-202ENST00000642062 1198 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CL1P78423 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CX3CL1P78423 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 WDR95P-201ENST00000425638 1542 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 MTND5P23-201ENST00000430812 1655 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 GUCY1B2-204ENST00000531898 1979 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CL1P78423 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC083837.1-201ENST00000565297 2994 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CX3CL1P78423 RNA5SP77-201ENST00000365394 120 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CX3CL1P78423 DHFRP2-201ENST00000414224 547 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 OSTCP4-201ENST00000424397 449 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 ZNF965P-201ENST00000432501 817 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC046176.1-201ENST00000435260 1170 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms