Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VSX2P58304 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 AP002512.4-202ENST00000641599 4530 ntBASIC5.68□□□□□ -1.5
VSX2P58304 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 AP001157.1-201ENST00000550837 2339 ntBASIC5.68□□□□□ -1.5
VSX2P58304 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VSX2P58304 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 AC023490.2-201ENST00000359859 470 ntBASIC5.68□□□□□ -1.5
VSX2P58304 RN7SKP128-201ENST00000364270 303 ntBASIC5.68□□□□□ -1.5
VSX2P58304 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 AC021876.1-201ENST00000425959 359 ntBASIC5.68□□□□□ -1.5
VSX2P58304 AC099677.3-201ENST00000427081 395 ntBASIC5.68□□□□□ -1.5
VSX2P58304 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.68□□□□□ -1.5
VSX2P58304 AL445928.1-201ENST00000435545 222 ntBASIC5.68□□□□□ -1.5
VSX2P58304 PCBP2P1-201ENST00000437262 977 ntBASIC5.68□□□□□ -1.5
VSX2P58304 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.68□□□□□ -1.5
VSX2P58304 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 AL162739.1-201ENST00000450606 307 ntBASIC5.68□□□□□ -1.5
VSX2P58304 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.68□□□□□ -1.5
VSX2P58304 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.68□□□□□ -1.5
VSX2P58304 RNA5SP271-201ENST00000516700 88 ntBASIC5.68□□□□□ -1.5
VSX2P58304 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.68□□□□□ -1.5
VSX2P58304 AP004609.2-201ENST00000532177 190 ntBASIC5.68□□□□□ -1.5
VSX2P58304 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.68□□□□□ -1.5
VSX2P58304 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.68□□□□□ -1.5
VSX2P58304 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.68□□□□□ -1.5
VSX2P58304 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.68□□□□□ -1.5
VSX2P58304 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
VSX2P58304 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
VSX2P58304 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.68□□□□□ -1.5
VSX2P58304 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.67□□□□□ -1.5
VSX2P58304 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
VSX2P58304 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 AC005725.1-201ENST00000577346 2607 ntBASIC5.67□□□□□ -1.5
VSX2P58304 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.67□□□□□ -1.5
VSX2P58304 AC140134.1-201ENST00000511830 3544 ntBASIC5.67□□□□□ -1.5
VSX2P58304 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.67□□□□□ -1.5
VSX2P58304 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 MSL3P1-202ENST00000440028 1468 ntBASIC5.67□□□□□ -1.5
VSX2P58304 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.67□□□□□ -1.5
VSX2P58304 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VSX2P58304 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.67□□□□□ -1.5
VSX2P58304 MYL6P5-201ENST00000412707 459 ntBASIC5.67□□□□□ -1.5
VSX2P58304 SLC20A1P1-201ENST00000413906 956 ntBASIC5.67□□□□□ -1.5
VSX2P58304 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.67□□□□□ -1.5
VSX2P58304 AC015977.1-201ENST00000418887 292 ntBASIC5.67□□□□□ -1.5
VSX2P58304 KIF4CP-201ENST00000422742 1279 ntBASIC5.67□□□□□ -1.5
VSX2P58304 SETP9-201ENST00000423837 832 ntBASIC5.67□□□□□ -1.5
VSX2P58304 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 BX323845.3-201ENST00000428215 527 ntBASIC5.67□□□□□ -1.5
VSX2P58304 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.67□□□□□ -1.5
VSX2P58304 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 CUBNP2-201ENST00000443534 1139 ntBASIC5.67□□□□□ -1.5
VSX2P58304 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 SLC25A51P1-201ENST00000468432 871 ntBASIC5.67□□□□□ -1.5
VSX2P58304 AL122020.1-201ENST00000472287 459 ntBASIC5.67□□□□□ -1.5
VSX2P58304 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.67□□□□□ -1.5
VSX2P58304 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.67□□□□□ -1.5
VSX2P58304 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VSX2P58304 SETP3-201ENST00000581726 813 ntBASIC5.67□□□□□ -1.5
VSX2P58304 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.67□□□□□ -1.5
VSX2P58304 OR7A8P-201ENST00000595427 913 ntBASIC5.67□□□□□ -1.5
VSX2P58304 AL583832.1-201ENST00000603227 784 ntBASIC5.67□□□□□ -1.5
VSX2P58304 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.67□□□□□ -1.5
VSX2P58304 THAP12P9-201ENST00000503971 2360 ntBASIC5.67□□□□□ -1.5
VSX2P58304 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.67□□□□□ -1.5
VSX2P58304 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VSX2P58304 AC091305.2-201ENST00000624049 1576 ntBASIC5.67□□□□□ -1.5
VSX2P58304 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSX2P58304 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms