Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC005899.6-201ENST00000620729 297 ntBASIC5.83□□□□□ -1.48
CDH13P55290 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH13P55290 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 AC020656.2-201ENST00000613291 5309 ntBASIC5.83□□□□□ -1.48
CDH13P55290 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH13P55290 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
CDH13P55290 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
CDH13P55290 SNORA21-201ENST00000362423 132 ntBASIC5.82□□□□□ -1.48
CDH13P55290 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH13P55290 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 MTATP6P19-201ENST00000413797 659 ntBASIC5.82□□□□□ -1.48
CDH13P55290 VN1R31P-201ENST00000417498 730 ntBASIC5.82□□□□□ -1.48
CDH13P55290 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 NMD3P2-201ENST00000421815 761 ntBASIC5.82□□□□□ -1.48
CDH13P55290 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 RAB9AP5-201ENST00000437794 597 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AC064862.5-201ENST00000440618 334 ntBASIC5.82□□□□□ -1.48
CDH13P55290 SEPT14P12-201ENST00000442280 560 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 RAB9AP2-201ENST00000443911 597 ntBASIC5.82□□□□□ -1.48
CDH13P55290 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH13P55290 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 OSTCP1-201ENST00000455507 450 ntBASIC5.82□□□□□ -1.48
CDH13P55290 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH13P55290 RN7SL552P-201ENST00000462094 276 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH13P55290 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH13P55290 HMGN1P17-201ENST00000513734 295 ntBASIC5.82□□□□□ -1.48
CDH13P55290 CR383658.1-201ENST00000514609 734 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AC117525.1-201ENST00000515228 503 ntBASIC5.82□□□□□ -1.48
CDH13P55290 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH13P55290 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 NPIPB14P-203ENST00000532298 987 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 AC022387.2-201ENST00000604050 448 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH13P55290 AL590410.1-201ENST00000617925 333 ntBASIC5.82□□□□□ -1.48
CDH13P55290 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH13P55290 AL138693.1-201ENST00000622219 129 ntBASIC5.82□□□□□ -1.48
CDH13P55290 AC010325.3-201ENST00000641084 394 ntBASIC5.82□□□□□ -1.48
CDH13P55290 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CDH13P55290 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH13P55290 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH13P55290 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH13P55290 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH13P55290 AC012078.1-201ENST00000405035 1646 ntBASIC5.81□□□□□ -1.48
CDH13P55290 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
CDH13P55290 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 RNU6-670P-201ENST00000364312 104 ntBASIC5.81□□□□□ -1.48
CDH13P55290 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH13P55290 AL139039.2-201ENST00000407436 479 ntBASIC5.81□□□□□ -1.48
CDH13P55290 CBX1P3-201ENST00000413296 527 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH13P55290 RPL7AP14-201ENST00000424041 802 ntBASIC5.81□□□□□ -1.48
CDH13P55290 RPL12P12-201ENST00000424633 501 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 KRT8P51-201ENST00000438938 274 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 AC097359.1-201ENST00000447946 463 ntBASIC5.81□□□□□ -1.48
CDH13P55290 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 AC002553.3-201ENST00000453002 341 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC004890.1-201ENST00000461005 181 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 AL603882.1-201ENST00000463059 681 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 ST13P12-201ENST00000508958 1094 ntBASIC5.81□□□□□ -1.48
CDH13P55290 NACAP5-201ENST00000509863 636 ntBASIC5.81□□□□□ -1.48
CDH13P55290 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms