Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COPB1P53618 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 MTND4P21-201ENST00000453886 1357 ntBASIC6.57□□□□□ -1.36
COPB1P53618 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COPB1P53618 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COPB1P53618 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 RNU6-891P-201ENST00000384280 111 ntBASIC6.56□□□□□ -1.36
COPB1P53618 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 AL359885.1-201ENST00000415786 903 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.56□□□□□ -1.36
COPB1P53618 TRGV7-201ENST00000427089 353 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 RPL5P10-201ENST00000445207 894 ntBASIC6.56□□□□□ -1.36
COPB1P53618 VN1R48P-201ENST00000448149 1036 ntBASIC6.56□□□□□ -1.36
COPB1P53618 RSU1P1-201ENST00000453416 441 ntBASIC6.56□□□□□ -1.36
COPB1P53618 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 RBMY2HP-201ENST00000457961 720 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 RPS7P10-201ENST00000464254 603 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 AC122718.2-201ENST00000505325 591 ntBASIC6.56□□□□□ -1.36
COPB1P53618 SNORA74.1-201ENST00000516320 180 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AC078899.1-201ENST00000521432 1185 ntBASIC6.56□□□□□ -1.36
COPB1P53618 HNRNPRP2-201ENST00000528421 743 ntBASIC6.56□□□□□ -1.36
COPB1P53618 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COPB1P53618 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.56□□□□□ -1.36
COPB1P53618 MIR3157-201ENST00000578688 85 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AC012368.3-201ENST00000604190 219 ntBASIC6.56□□□□□ -1.36
COPB1P53618 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 AC069542.2-201ENST00000624816 216 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AC063952.1-203ENST00000634410 658 ntBASIC6.56□□□□□ -1.36
COPB1P53618 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 AC027575.3-201ENST00000583058 2747 ntBASIC6.56□□□□□ -1.36
COPB1P53618 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.56□□□□□ -1.36
COPB1P53618 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.56□□□□□ -1.36
COPB1P53618 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COPB1P53618 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COPB1P53618 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPB1P53618 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COPB1P53618 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 CXADRP1-201ENST00000398098 1095 ntBASIC6.55□□□□□ -1.36
COPB1P53618 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 RPL35AP31-201ENST00000418340 337 ntBASIC6.55□□□□□ -1.36
COPB1P53618 NMD3P2-201ENST00000421815 761 ntBASIC6.55□□□□□ -1.36
COPB1P53618 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 PSMD10P2-201ENST00000432890 672 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AL590762.3-201ENST00000436372 640 ntBASIC6.55□□□□□ -1.36
COPB1P53618 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.55□□□□□ -1.36
COPB1P53618 SCAND3P1-201ENST00000439854 1060 ntBASIC6.55□□□□□ -1.36
COPB1P53618 RPSAP40-201ENST00000442343 891 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 AC234771.2-201ENST00000445718 597 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AC016027.4-201ENST00000450866 277 ntBASIC6.55□□□□□ -1.36
COPB1P53618 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.55□□□□□ -1.36
COPB1P53618 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms