Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP001541.1-201ENST00000623322 1904 ntBASIC5.52□□□□□ -1.53
SOX2P48431 CCNT2P1-201ENST00000423082 1315 ntBASIC5.52□□□□□ -1.53
SOX2P48431 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX2P48431 RBPJP6-201ENST00000411556 1431 ntBASIC5.52□□□□□ -1.53
SOX2P48431 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 OR7A2P-201ENST00000304105 930 ntBASIC5.52□□□□□ -1.53
SOX2P48431 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SOX2P48431 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SOX2P48431 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SOX2P48431 TAF9BP2-201ENST00000400856 499 ntBASIC5.52□□□□□ -1.53
SOX2P48431 GSTA12P-201ENST00000402398 508 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AL355615.1-201ENST00000406187 641 ntBASIC5.52□□□□□ -1.53
SOX2P48431 RN7SKP281-201ENST00000410472 352 ntBASIC5.52□□□□□ -1.53
SOX2P48431 TATDN1P1-201ENST00000414123 891 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AL158827.1-201ENST00000416300 391 ntBASIC5.52□□□□□ -1.53
SOX2P48431 YWHAZP5-201ENST00000419975 730 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AL157884.1-201ENST00000424561 454 ntBASIC5.52□□□□□ -1.53
SOX2P48431 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX2P48431 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX2P48431 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX2P48431 CHCHD4P5-201ENST00000436684 427 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC019185.3-201ENST00000438805 323 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX2P48431 RPL6P24-201ENST00000445338 864 ntBASIC5.52□□□□□ -1.53
SOX2P48431 CCNJP1-201ENST00000450600 1149 ntBASIC5.52□□□□□ -1.53
SOX2P48431 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.52□□□□□ -1.53
SOX2P48431 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 AL445687.2-201ENST00000458156 728 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.52□□□□□ -1.53
SOX2P48431 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.52□□□□□ -1.53
SOX2P48431 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.52□□□□□ -1.53
SOX2P48431 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX2P48431 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 RN7SL689P-201ENST00000577215 297 ntBASIC5.52□□□□□ -1.53
SOX2P48431 MIR4509-3-201ENST00000578671 94 ntBASIC5.52□□□□□ -1.53
SOX2P48431 RN7SL131P-201ENST00000579043 256 ntBASIC5.52□□□□□ -1.53
SOX2P48431 MIR4509-2-201ENST00000583920 94 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX2P48431 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX2P48431 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.52□□□□□ -1.53
SOX2P48431 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX2P48431 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 AC079880.2-201ENST00000603790 1213 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC009974.1-201ENST00000608881 455 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC124016.2-201ENST00000610058 665 ntBASIC5.52□□□□□ -1.53
SOX2P48431 MIR6731-201ENST00000614863 72 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC009283.1-201ENST00000615852 645 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC078880.5-201ENST00000617845 421 ntBASIC5.52□□□□□ -1.53
SOX2P48431 MIR4509-1-201ENST00000618224 94 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AP000484.1-201ENST00000620067 1252 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AL121985.3-201ENST00000620690 523 ntBASIC5.52□□□□□ -1.53
SOX2P48431 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX2P48431 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX2P48431 AC018628.1-201ENST00000624147 3819 ntBASIC5.52□□□□□ -1.53
SOX2P48431 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.52□□□□□ -1.53
SOX2P48431 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX2P48431 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX2P48431 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.51□□□□□ -1.53
SOX2P48431 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 UGT2B24P-201ENST00000514441 1597 ntBASIC5.51□□□□□ -1.53
SOX2P48431 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 AL356317.1-201ENST00000396110 1436 ntBASIC5.51□□□□□ -1.53
SOX2P48431 AC074141.1-201ENST00000588129 2995 ntBASIC5.51□□□□□ -1.53
SOX2P48431 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 AC092692.1-201ENST00000623625 2595 ntBASIC5.51□□□□□ -1.53
SOX2P48431 AC096921.2-201ENST00000561507 1916 ntBASIC5.51□□□□□ -1.53
SOX2P48431 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 SNORD35A-201ENST00000363389 86 ntBASIC5.51□□□□□ -1.53
SOX2P48431 RNA5SP429-201ENST00000363688 109 ntBASIC5.51□□□□□ -1.53
SOX2P48431 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 RPL23AP17-201ENST00000401064 499 ntBASIC5.51□□□□□ -1.53
SOX2P48431 RN7SKP39-201ENST00000410773 322 ntBASIC5.51□□□□□ -1.53
SOX2P48431 RN7SKP91-201ENST00000410852 288 ntBASIC5.51□□□□□ -1.53
SOX2P48431 RMRPP5-201ENST00000411156 267 ntBASIC5.51□□□□□ -1.53
SOX2P48431 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 AHCYP8-201ENST00000425108 209 ntBASIC5.51□□□□□ -1.53
SOX2P48431 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 RPL7P61-201ENST00000451721 751 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms