Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CD40LGP29965 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.25□□□□□ -1.57
CD40LGP29965 MIR378H-201ENST00000579966 83 ntBASIC5.25□□□□□ -1.57
CD40LGP29965 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.25□□□□□ -1.57
CD40LGP29965 AC005514.1-201ENST00000623521 208 ntBASIC5.25□□□□□ -1.57
CD40LGP29965 CLUHP10-201ENST00000631979 980 ntBASIC5.25□□□□□ -1.57
CD40LGP29965 FRG1EP-201ENST00000634469 770 ntBASIC5.25□□□□□ -1.57
CD40LGP29965 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.25□□□□□ -1.57
CD40LGP29965 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.25□□□□□ -1.57
CD40LGP29965 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.25□□□□□ -1.57
CD40LGP29965 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CD40LGP29965 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CD40LGP29965 MTCO1P46-201ENST00000451639 1491 ntBASIC5.25□□□□□ -1.57
CD40LGP29965 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CD40LGP29965 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.25□□□□□ -1.57
CD40LGP29965 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CD40LGP29965 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CD40LGP29965 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CD40LGP29965 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CD40LGP29965 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 AC093909.5-201ENST00000621839 1799 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 AL133243.2-201ENST00000610331 1621 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CD40LGP29965 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 RN7SKP281-201ENST00000410472 352 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 RNA5SP155-201ENST00000411154 129 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 RNGTTP1-201ENST00000420965 728 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 OR10T1P-201ENST00000424327 947 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC234771.4-201ENST00000441416 730 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40LGP29965 UBBP5-201ENST00000446970 266 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AL445991.1-201ENST00000450381 475 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC112184.1-201ENST00000505179 312 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 IGLV3-24-201ENST00000517477 197 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AC113191.1-201ENST00000517759 403 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC131935.1-201ENST00000524621 333 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.24□□□□□ -1.57
CD40LGP29965 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40LGP29965 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40LGP29965 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40LGP29965 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40LGP29965 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC015660.5-201ENST00000623238 564 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AC091059.2-201ENST00000623355 614 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 AC061999.1-201ENST00000624454 177 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40LGP29965 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40LGP29965 AC073488.6-201ENST00000632293 754 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 SAMMSON-227ENST00000642114 1199 ntBASIC5.24□□□□□ -1.57
CD40LGP29965 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40LGP29965 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
CD40LGP29965 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40LGP29965 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40LGP29965 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40LGP29965 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 GVINP1-202ENST00000531871 7271 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40LGP29965 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40LGP29965 RN7SKP184-201ENST00000362348 333 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC002524.1-201ENST00000411687 547 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40LGP29965 CTSL3P-202ENST00000412179 788 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AC234781.4-201ENST00000419384 244 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40LGP29965 PTPN2P1-201ENST00000423212 1072 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AL645939.3-201ENST00000435408 225 ntBASIC5.23□□□□□ -1.57
CD40LGP29965 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms