Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC9.67□□□□□ -0.86
CFTRP13569 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CFTRP13569 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.67□□□□□ -0.86
CFTRP13569 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CFTRP13569 HNRNPA3P4-201ENST00000427514 803 ntBASIC9.67□□□□□ -0.86
CFTRP13569 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC9.67□□□□□ -0.86
CFTRP13569 RPS29P33-201ENST00000456717 146 ntBASIC9.67□□□□□ -0.86
CFTRP13569 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC9.67□□□□□ -0.86
CFTRP13569 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC9.67□□□□□ -0.86
CFTRP13569 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC9.67□□□□□ -0.86
CFTRP13569 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CFTRP13569 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC9.67□□□□□ -0.86
CFTRP13569 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.67□□□□□ -0.86
CFTRP13569 MFSD8-239ENST00000641590 2479 ntBASIC9.67□□□□□ -0.86
CFTRP13569 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CFTRP13569 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CFTRP13569 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CFTRP13569 MITF-203ENST00000328528 4680 ntTSL 5 BASIC9.67□□□□□ -0.86
CFTRP13569 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CFTRP13569 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC9.66□□□□□ -0.86
CFTRP13569 VDAC1P6-201ENST00000430062 855 ntBASIC9.66□□□□□ -0.86
CFTRP13569 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC9.66□□□□□ -0.86
CFTRP13569 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC9.66□□□□□ -0.86
CFTRP13569 AF230666.2-201ENST00000602328 725 ntBASIC9.66□□□□□ -0.86
CFTRP13569 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.66□□□□□ -0.86
CFTRP13569 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.66□□□□□ -0.86
CFTRP13569 AL731566.2-201ENST00000618971 317 ntBASIC9.66□□□□□ -0.86
CFTRP13569 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
CFTRP13569 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CFTRP13569 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
CFTRP13569 AC002090.1-201ENST00000625000 2138 ntBASIC9.66□□□□□ -0.86
CFTRP13569 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CFTRP13569 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CFTRP13569 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CFTRP13569 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.66□□□□□ -0.86
CFTRP13569 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
CFTRP13569 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CFTRP13569 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
CFTRP13569 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.66□□□□□ -0.86
CFTRP13569 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CFTRP13569 AC114947.2-201ENST00000565748 2125 ntBASIC9.66□□□□□ -0.86
CFTRP13569 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CFTRP13569 SNORA17.1-201ENST00000362945 126 ntBASIC9.66□□□□□ -0.86
CFTRP13569 SNORA16A-201ENST00000384342 137 ntBASIC9.66□□□□□ -0.86
CFTRP13569 AC013442.1-201ENST00000397347 228 ntBASIC9.66□□□□□ -0.86
CFTRP13569 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC9.66□□□□□ -0.86
CFTRP13569 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC9.66□□□□□ -0.86
CFTRP13569 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.66□□□□□ -0.86
CFTRP13569 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9.66□□□□□ -0.86
CFTRP13569 AC092324.1-201ENST00000468671 324 ntBASIC9.66□□□□□ -0.86
CFTRP13569 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC9.66□□□□□ -0.86
CFTRP13569 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC9.66□□□□□ -0.86
CFTRP13569 AL671862.1-201ENST00000515851 349 ntBASIC9.66□□□□□ -0.86
CFTRP13569 AC063949.1-201ENST00000552900 865 ntBASIC9.66□□□□□ -0.86
CFTRP13569 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC9.66□□□□□ -0.86
CFTRP13569 MIR4697-201ENST00000582977 78 ntBASIC9.66□□□□□ -0.86
CFTRP13569 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC9.66□□□□□ -0.86
CFTRP13569 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
CFTRP13569 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CFTRP13569 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CFTRP13569 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CFTRP13569 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CFTRP13569 OR55B1P-203ENST00000641518 2602 ntBASIC9.65□□□□□ -0.86
CFTRP13569 AC018765.1-201ENST00000623357 3446 ntBASIC9.65□□□□□ -0.87
CFTRP13569 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.65□□□□□ -0.87
CFTRP13569 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC9.65□□□□□ -0.87
CFTRP13569 RNU1-43P-201ENST00000365052 165 ntBASIC9.65□□□□□ -0.87
CFTRP13569 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC9.65□□□□□ -0.87
CFTRP13569 DUTP1-201ENST00000493631 470 ntBASIC9.65□□□□□ -0.87
CFTRP13569 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC9.65□□□□□ -0.87
CFTRP13569 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC9.65□□□□□ -0.87
CFTRP13569 BRD9P1-201ENST00000529855 560 ntBASIC9.65□□□□□ -0.87
CFTRP13569 AL121594.2-201ENST00000541658 472 ntBASIC9.65□□□□□ -0.87
CFTRP13569 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC9.65□□□□□ -0.87
CFTRP13569 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CFTRP13569 AL022394.1-201ENST00000606979 292 ntBASIC9.65□□□□□ -0.87
CFTRP13569 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CFTRP13569 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CFTRP13569 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.65□□□□□ -0.87
CFTRP13569 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CFTRP13569 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
CFTRP13569 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC9.64□□□□□ -0.87
CFTRP13569 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC9.64□□□□□ -0.87
CFTRP13569 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC9.64□□□□□ -0.87
CFTRP13569 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 AC068138.1-201ENST00000412635 217 ntBASIC9.64□□□□□ -0.87
CFTRP13569 AC104837.2-201ENST00000427236 424 ntBASIC9.64□□□□□ -0.87
CFTRP13569 EIF2S2P3-201ENST00000428356 999 ntBASIC9.64□□□□□ -0.87
CFTRP13569 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
CFTRP13569 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC9.64□□□□□ -0.87
CFTRP13569 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.64□□□□□ -0.87
CFTRP13569 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC9.64□□□□□ -0.87
CFTRP13569 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC9.64□□□□□ -0.87
CFTRP13569 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms