Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBCP0CG48 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBCP0CG48 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.21□□□□□ -1.58
UBCP0CG48 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBCP0CG48 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBCP0CG48 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBCP0CG48 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.21□□□□□ -1.58
UBCP0CG48 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBCP0CG48 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 LINC01613-201ENST00000561476 2780 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 SNORA64.3-201ENST00000365647 134 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC130360.1-201ENST00000425489 1117 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 NPM1P18-201ENST00000434232 732 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC096632.2-201ENST00000438139 1239 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 SEPT14P12-201ENST00000442280 560 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 TRIM60P16-201ENST00000444048 694 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC002553.3-201ENST00000453002 341 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 RBMY2HP-201ENST00000457961 720 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC104849.1-201ENST00000462623 405 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC018639.1-201ENST00000492994 442 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.2□□□□□ -1.58
UBCP0CG48 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC130365.2-201ENST00000525882 1201 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 BMS1P16-201ENST00000556075 1147 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC005632.2-201ENST00000564271 828 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC090826.1-203ENST00000569235 490 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 LINC00556-201ENST00000569603 412 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 AP005136.2-201ENST00000583253 1049 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.2□□□□□ -1.58
UBCP0CG48 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC063977.7-201ENST00000594454 337 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 AC089999.3-201ENST00000622440 577 ntBASIC5.2□□□□□ -1.58
UBCP0CG48 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
UBCP0CG48 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
UBCP0CG48 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBCP0CG48 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
UBCP0CG48 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.19□□□□□ -1.58
UBCP0CG48 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
UBCP0CG48 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.19□□□□□ -1.58
UBCP0CG48 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.19□□□□□ -1.58
UBCP0CG48 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.19□□□□□ -1.58
UBCP0CG48 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UBCP0CG48 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UBCP0CG48 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.19□□□□□ -1.58
UBCP0CG48 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UBCP0CG48 PSMA6P1-201ENST00000400275 741 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 AL132875.1-201ENST00000403623 949 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
UBCP0CG48 MTND2P40-201ENST00000436718 841 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.19□□□□□ -1.58
UBCP0CG48 AC245291.3-201ENST00000443400 292 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 AC234771.2-201ENST00000445718 597 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 ZNF619P1-201ENST00000446539 752 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 AC097359.1-201ENST00000447946 463 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 PPIAP32-201ENST00000449940 472 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.19□□□□□ -1.58
UBCP0CG48 FRG2FP-204ENST00000453982 852 ntBASIC5.19□□□□□ -1.58
UBCP0CG48 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UBCP0CG48 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.19□□□□□ -1.58
UBCP0CG48 EIF4E2P2-201ENST00000492033 736 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms