Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RN7SL72P-201ENST00000460697 269 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 RPL32P9-201ENST00000487963 407 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 COX6B1P2-201ENST00000489624 230 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 OR7E157P-201ENST00000494376 911 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC6P09630 AC093763.2-201ENST00000505334 1223 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC6P09630 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC6P09630 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC6P09630 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC6P09630 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC6P09630 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC6P09630 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC6P09630 AL683813.2-201ENST00000605245 502 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 AL136370.1-201ENST00000608166 691 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 AC087821.1-201ENST00000623639 567 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC6P09630 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC6P09630 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC6P09630 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC6P09630 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC6P09630 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.7□□□□□ -1.34
HOXC6P09630 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC6P09630 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
HOXC6P09630 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC6P09630 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC6P09630 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
HOXC6P09630 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC6P09630 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
HOXC6P09630 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HOXC6P09630 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC6P09630 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC6P09630 AC016583.1-201ENST00000624221 2431 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC6P09630 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC6P09630 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
HOXC6P09630 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HOXC6P09630 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC6P09630 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC6P09630 SNORD8-201ENST00000363915 110 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.69□□□□□ -1.34
HOXC6P09630 MIR1286-201ENST00000408112 78 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC6P09630 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC6P09630 MYL6P5-201ENST00000412707 459 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 OR6E1P-201ENST00000414424 923 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC6P09630 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC6P09630 AC012075.1-201ENST00000436549 580 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 FRG2FP-204ENST00000453982 852 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 RN7SL610P-201ENST00000463845 291 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.69□□□□□ -1.34
HOXC6P09630 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC6P09630 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC6P09630 IGLV3-30-201ENST00000524362 298 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC6P09630 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC6P09630 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC6P09630 AC008115.3-201ENST00000614874 549 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC6P09630 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC6P09630 AC087269.2-201ENST00000641764 975 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 AC109780.1-201ENST00000451768 1344 ntBASIC6.69□□□□□ -1.34
HOXC6P09630 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC6P09630 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC6P09630 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.68□□□□□ -1.34
HOXC6P09630 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC6P09630 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 RNA5SP211-201ENST00000365516 117 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 AP000534.2-201ENST00000412729 568 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC6P09630 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.68□□□□□ -1.34
HOXC6P09630 CYCSP51-201ENST00000443545 318 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC6P09630 SDC4P-201ENST00000453285 601 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC6P09630 AC007386.1-201ENST00000455212 582 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 ACTR6P1-201ENST00000514311 1104 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 NRBF2P4-201ENST00000520874 850 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC6P09630 OR7E158P-201ENST00000524483 910 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 OR4A40P-201ENST00000533878 948 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.68□□□□□ -1.34
HOXC6P09630 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.68□□□□□ -1.34
HOXC6P09630 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.68□□□□□ -1.34
HOXC6P09630 AC004948.1-201ENST00000609858 672 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.68□□□□□ -1.34
HOXC6P09630 AC118658.2-201ENST00000618697 459 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC6P09630 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HOXC6P09630 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms