Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 MRPS21P8-201ENST00000569196 235 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 RN7SL290P-201ENST00000578661 300 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 RN7SL475P-201ENST00000583379 298 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.46□□□□□ -1.7
CXCL1P09341 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.46□□□□□ -1.7
CXCL1P09341 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CXCL1P09341 AC133552.1-201ENST00000569988 4007 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.45□□□□□ -1.7
CXCL1P09341 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 RNU105B-201ENST00000364478 208 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 RN7SKP117-201ENST00000410175 264 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 RPS15AP30-201ENST00000420976 390 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AL672212.1-201ENST00000422246 400 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 RPS7P14-201ENST00000426405 583 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL1P09341 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.45□□□□□ -1.7
CXCL1P09341 OR3D1P-201ENST00000438288 955 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AL592114.2-201ENST00000440142 532 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 LINC02210-201ENST00000444561 288 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 POU5F1P5-201ENST00000445059 658 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.45□□□□□ -1.7
CXCL1P09341 RNA5SP103-201ENST00000459503 118 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 RN7SL372P-201ENST00000461982 298 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 RN7SL70P-201ENST00000478322 302 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AL049874.2-201ENST00000492636 288 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 RPS26P24-201ENST00000497656 331 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL1P09341 AC096661.1-201ENST00000515870 822 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL1P09341 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.45□□□□□ -1.7
CXCL1P09341 AC023080.1-201ENST00000551663 931 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.45□□□□□ -1.7
CXCL1P09341 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL1P09341 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.45□□□□□ -1.7
CXCL1P09341 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL1P09341 NANOGP3-201ENST00000605855 286 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.45□□□□□ -1.7
CXCL1P09341 AL139124.1-201ENST00000609123 421 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AL139407.1-201ENST00000613826 1175 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AC241377.1-201ENST00000619797 406 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AC091932.2-201ENST00000623014 291 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CXCL1P09341 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CXCL1P09341 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 SMG1P4-204ENST00000523028 4131 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.45□□□□□ -1.7
CXCL1P09341 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 MFSD8-239ENST00000641590 2479 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL1P09341 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CXCL1P09341 AL078621.3-201ENST00000623707 2042 ntBASIC4.45□□□□□ -1.7
CXCL1P09341 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC011447.7-201ENST00000624228 1590 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 MAPK10-349ENST00000641767 3661 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 RNA5SP279-201ENST00000365513 117 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CXCL1P09341 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 RNA5SP241-201ENST00000391326 114 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 AL353133.1-201ENST00000407695 401 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms