Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.4□□□□□ -1.38
VTNP04004 IMMTP1-201ENST00000435590 2219 ntBASIC6.4□□□□□ -1.38
VTNP04004 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.4□□□□□ -1.38
VTNP04004 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.4□□□□□ -1.38
VTNP04004 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.4□□□□□ -1.38
VTNP04004 AL355994.1-201ENST00000424379 260 ntBASIC6.4□□□□□ -1.38
VTNP04004 GAPDHP48-201ENST00000436626 961 ntBASIC6.4□□□□□ -1.38
VTNP04004 Z84478.1-201ENST00000438230 1219 ntBASIC6.4□□□□□ -1.38
VTNP04004 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.4□□□□□ -1.38
VTNP04004 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.4□□□□□ -1.38
VTNP04004 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.4□□□□□ -1.38
VTNP04004 RPS26P39-201ENST00000469206 341 ntBASIC6.4□□□□□ -1.38
VTNP04004 RN7SL214P-201ENST00000487317 265 ntBASIC6.4□□□□□ -1.38
VTNP04004 OR7E157P-201ENST00000494376 911 ntBASIC6.4□□□□□ -1.38
VTNP04004 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 AC139365.2-201ENST00000517972 253 ntBASIC6.4□□□□□ -1.38
VTNP04004 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.4□□□□□ -1.38
VTNP04004 AC125612.1-201ENST00000547580 377 ntBASIC6.4□□□□□ -1.38
VTNP04004 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 MIR4489-201ENST00000578869 62 ntBASIC6.4□□□□□ -1.38
VTNP04004 MIR4260-201ENST00000583107 67 ntBASIC6.4□□□□□ -1.38
VTNP04004 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.4□□□□□ -1.38
VTNP04004 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.4□□□□□ -1.38
VTNP04004 AC130304.1-201ENST00000622942 2385 ntBASIC6.4□□□□□ -1.39
VTNP04004 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VTNP04004 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VTNP04004 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VTNP04004 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VTNP04004 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.4□□□□□ -1.39
VTNP04004 SRRM1P3-201ENST00000426911 2678 ntBASIC6.4□□□□□ -1.39
VTNP04004 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.4□□□□□ -1.39
VTNP04004 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
VTNP04004 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
VTNP04004 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
VTNP04004 GTF2IP4-201ENST00000453092 2054 ntBASIC6.39□□□□□ -1.39
VTNP04004 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
VTNP04004 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
VTNP04004 AL159987.1-201ENST00000347911 293 ntBASIC6.39□□□□□ -1.39
VTNP04004 AL360271.1-201ENST00000395679 510 ntBASIC6.39□□□□□ -1.39
VTNP04004 OR6E1P-201ENST00000414424 923 ntBASIC6.39□□□□□ -1.39
VTNP04004 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.39□□□□□ -1.39
VTNP04004 BMS1P17-202ENST00000416720 316 ntBASIC6.39□□□□□ -1.39
VTNP04004 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 AL022331.1-201ENST00000429025 477 ntBASIC6.39□□□□□ -1.39
VTNP04004 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.39□□□□□ -1.39
VTNP04004 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.39□□□□□ -1.39
VTNP04004 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.39□□□□□ -1.39
VTNP04004 FRG2FP-204ENST00000453982 852 ntBASIC6.39□□□□□ -1.39
VTNP04004 RN7SL72P-201ENST00000460697 269 ntBASIC6.39□□□□□ -1.39
VTNP04004 AC110749.1-201ENST00000462007 357 ntBASIC6.39□□□□□ -1.39
VTNP04004 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
VTNP04004 RPL17P2-201ENST00000491913 451 ntBASIC6.39□□□□□ -1.39
VTNP04004 RN7SL466P-201ENST00000497546 295 ntBASIC6.39□□□□□ -1.39
VTNP04004 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.39□□□□□ -1.39
VTNP04004 ATP5LP3-201ENST00000514223 304 ntBASIC6.39□□□□□ -1.39
VTNP04004 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.39□□□□□ -1.39
VTNP04004 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.39□□□□□ -1.39
VTNP04004 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.39□□□□□ -1.39
VTNP04004 MIR6826-201ENST00000617808 98 ntBASIC6.39□□□□□ -1.39
VTNP04004 AL691477.1-201ENST00000624398 162 ntBASIC6.39□□□□□ -1.39
VTNP04004 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 CIR1P2-201ENST00000514821 1342 ntBASIC6.39□□□□□ -1.39
VTNP04004 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.39□□□□□ -1.39
VTNP04004 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.39□□□□□ -1.39
VTNP04004 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.39□□□□□ -1.39
VTNP04004 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
VTNP04004 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTNP04004 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.38□□□□□ -1.39
VTNP04004 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.38□□□□□ -1.39
VTNP04004 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
VTNP04004 AC005725.1-201ENST00000577346 2607 ntBASIC6.38□□□□□ -1.39
VTNP04004 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
VTNP04004 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.38□□□□□ -1.39
VTNP04004 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.38□□□□□ -1.39
VTNP04004 AL596448.1-201ENST00000415024 392 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms