Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.51□□□□□ -1.53
MT-ND1P03886 PSMA6P1-201ENST00000400275 741 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.51□□□□□ -1.53
MT-ND1P03886 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.51□□□□□ -1.53
MT-ND1P03886 CRIP1P1-201ENST00000427567 185 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.51□□□□□ -1.53
MT-ND1P03886 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC096632.2-201ENST00000438139 1239 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AL663074.2-201ENST00000440621 479 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AC016027.4-201ENST00000450866 277 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.51□□□□□ -1.53
MT-ND1P03886 MRPL57P6-201ENST00000506570 309 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC138517.1-201ENST00000515724 568 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 MIR2117-201ENST00000516780 80 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC234775.3-201ENST00000564612 656 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.51□□□□□ -1.53
MT-ND1P03886 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC006115.2-201ENST00000596823 202 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AC012368.3-201ENST00000604190 219 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AC022001.1-201ENST00000605193 268 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AC096586.2-201ENST00000610260 441 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 AL354950.1-201ENST00000614150 568 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.51□□□□□ -1.53
MT-ND1P03886 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.51□□□□□ -1.53
MT-ND1P03886 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
MT-ND1P03886 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.51□□□□□ -1.53
MT-ND1P03886 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 CR382285.2-201ENST00000624662 1495 ntBASIC5.51□□□□□ -1.53
MT-ND1P03886 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
MT-ND1P03886 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
MT-ND1P03886 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.5□□□□□ -1.53
MT-ND1P03886 RNA5SP156-201ENST00000410250 110 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AL158827.1-201ENST00000416300 391 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 RPS7P8-201ENST00000418311 581 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.5□□□□□ -1.53
MT-ND1P03886 PSMD10P2-201ENST00000432890 672 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 RPS12P17-201ENST00000438591 377 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 RPS19P6-201ENST00000441327 433 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AL161722.1-201ENST00000446972 1032 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 MTND6P5-201ENST00000448266 512 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 RPS23P9-201ENST00000448848 438 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.5□□□□□ -1.53
MT-ND1P03886 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AC004129.2-201ENST00000457229 287 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AC104164.1-201ENST00000460282 590 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 RPS7P10-201ENST00000464254 603 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 Vault.2-201ENST00000516519 98 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AC022616.2-201ENST00000523185 300 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 OR56A7P-201ENST00000524865 941 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 CASP1P2-201ENST00000526830 1258 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.5□□□□□ -1.53
MT-ND1P03886 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 MIR6774-201ENST00000614651 70 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AC015712.7-201ENST00000615211 635 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AP003400.2-201ENST00000624036 666 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.5□□□□□ -1.53
MT-ND1P03886 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
MT-ND1P03886 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
MT-ND1P03886 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
MT-ND1P03886 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.5□□□□□ -1.53
MT-ND1P03886 MFSD8-239ENST00000641590 2479 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 AP004607.3-201ENST00000530354 3915 ntBASIC5.5□□□□□ -1.53
MT-ND1P03886 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.5□□□□□ -1.53
MT-ND1P03886 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.5□□□□□ -1.53
MT-ND1P03886 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MT-ND1P03886 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.49□□□□□ -1.53
MT-ND1P03886 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms