Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.1□□□□□ -1.27
MBD4O95243 RNU4-64P-201ENST00000410795 131 ntBASIC7.1□□□□□ -1.27
MBD4O95243 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.1□□□□□ -1.27
MBD4O95243 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.1□□□□□ -1.27
MBD4O95243 AP006222.1-205ENST00000450734 457 ntBASIC7.1□□□□□ -1.27
MBD4O95243 HMGB3P14-201ENST00000494195 599 ntBASIC7.1□□□□□ -1.27
MBD4O95243 PSMA2P2-201ENST00000504319 686 ntBASIC7.1□□□□□ -1.27
MBD4O95243 AC022784.5-201ENST00000522241 437 ntBASIC7.1□□□□□ -1.27
MBD4O95243 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.1□□□□□ -1.27
MBD4O95243 HNRNPRP2-201ENST00000528421 743 ntBASIC7.1□□□□□ -1.27
MBD4O95243 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.1□□□□□ -1.27
MBD4O95243 GARSP1-201ENST00000570895 719 ntBASIC7.1□□□□□ -1.27
MBD4O95243 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.1□□□□□ -1.27
MBD4O95243 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.1□□□□□ -1.27
MBD4O95243 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.1□□□□□ -1.27
MBD4O95243 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.1□□□□□ -1.27
MBD4O95243 TTC41P-205ENST00000551270 3963 ntBASIC7.1□□□□□ -1.27
MBD4O95243 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
MBD4O95243 THAP12P8-201ENST00000447914 2115 ntBASIC7.1□□□□□ -1.27
MBD4O95243 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
MBD4O95243 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.1□□□□□ -1.27
MBD4O95243 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
MBD4O95243 AC005725.1-201ENST00000577346 2607 ntBASIC7.1□□□□□ -1.27
MBD4O95243 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
MBD4O95243 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.1□□□□□ -1.27
MBD4O95243 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
MBD4O95243 AC005261.2-201ENST00000593427 4258 ntBASIC7.1□□□□□ -1.27
MBD4O95243 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.1□□□□□ -1.27
MBD4O95243 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
MBD4O95243 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.09□□□□□ -1.27
MBD4O95243 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.09□□□□□ -1.27
MBD4O95243 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.09□□□□□ -1.27
MBD4O95243 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
MBD4O95243 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.09□□□□□ -1.27
MBD4O95243 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
MBD4O95243 AC245060.4-201ENST00000413293 1121 ntBASIC7.09□□□□□ -1.27
MBD4O95243 AC017078.1-201ENST00000416146 368 ntBASIC7.09□□□□□ -1.27
MBD4O95243 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 AL663074.2-201ENST00000440621 479 ntBASIC7.09□□□□□ -1.27
MBD4O95243 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.09□□□□□ -1.27
MBD4O95243 AL157385.1-201ENST00000446973 268 ntBASIC7.09□□□□□ -1.27
MBD4O95243 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.09□□□□□ -1.27
MBD4O95243 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.09□□□□□ -1.27
MBD4O95243 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.09□□□□□ -1.27
MBD4O95243 SNORD46.2-201ENST00000516021 102 ntBASIC7.09□□□□□ -1.27
MBD4O95243 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.09□□□□□ -1.27
MBD4O95243 AC022826.1-201ENST00000519383 805 ntBASIC7.09□□□□□ -1.27
MBD4O95243 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.09□□□□□ -1.27
MBD4O95243 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.09□□□□□ -1.27
MBD4O95243 AP000648.1-201ENST00000529682 397 ntBASIC7.09□□□□□ -1.27
MBD4O95243 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
MBD4O95243 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC7.09□□□□□ -1.27
MBD4O95243 ZNF322P1-201ENST00000568013 1209 ntBASIC7.09□□□□□ -1.27
MBD4O95243 AC008521.2-201ENST00000591021 259 ntBASIC7.09□□□□□ -1.27
MBD4O95243 COX6CP7-201ENST00000597056 208 ntBASIC7.09□□□□□ -1.27
MBD4O95243 AL031601.1-201ENST00000605702 394 ntBASIC7.09□□□□□ -1.27
MBD4O95243 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.09□□□□□ -1.27
MBD4O95243 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.09□□□□□ -1.27
MBD4O95243 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
MBD4O95243 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.09□□□□□ -1.27
MBD4O95243 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MBD4O95243 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.09□□□□□ -1.27
MBD4O95243 THAP12P9-201ENST00000503971 2360 ntBASIC7.09□□□□□ -1.28
MBD4O95243 AL731532.1-201ENST00000623972 4236 ntBASIC7.09□□□□□ -1.28
MBD4O95243 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.09□□□□□ -1.28
MBD4O95243 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
MBD4O95243 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
MBD4O95243 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MBD4O95243 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MBD4O95243 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MBD4O95243 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MBD4O95243 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
MBD4O95243 ZNF101P1-201ENST00000435701 1720 ntBASIC7.08□□□□□ -1.28
MBD4O95243 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.08□□□□□ -1.28
MBD4O95243 RNA5SP122-201ENST00000384457 108 ntBASIC7.08□□□□□ -1.28
MBD4O95243 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
MBD4O95243 AL589994.1-201ENST00000404962 340 ntBASIC7.08□□□□□ -1.28
MBD4O95243 MTND4LP17-201ENST00000414607 293 ntBASIC7.08□□□□□ -1.28
MBD4O95243 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.08□□□□□ -1.28
MBD4O95243 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.08□□□□□ -1.28
MBD4O95243 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.08□□□□□ -1.28
MBD4O95243 CUBNP2-201ENST00000443534 1139 ntBASIC7.08□□□□□ -1.28
MBD4O95243 AL157777.1-201ENST00000468100 304 ntBASIC7.08□□□□□ -1.28
MBD4O95243 RPL38P3-201ENST00000484463 213 ntBASIC7.08□□□□□ -1.28
MBD4O95243 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.08□□□□□ -1.28
MBD4O95243 UGT2A3P7-201ENST00000510485 734 ntBASIC7.08□□□□□ -1.28
MBD4O95243 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MBD4O95243 RN7SKP288-201ENST00000516227 268 ntBASIC7.08□□□□□ -1.28
MBD4O95243 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.08□□□□□ -1.28
MBD4O95243 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.08□□□□□ -1.28
MBD4O95243 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.08□□□□□ -1.28
MBD4O95243 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms