Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL049697.3-201ENST00000406493 982 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AL023284.3-201ENST00000407767 334 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 TMA16P2-201ENST00000413187 601 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 GLUD1P9-201ENST00000420997 1173 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 DSTNP5-201ENST00000427921 523 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC073508.1-201ENST00000428866 656 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 LDHAP2-201ENST00000437325 985 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 SNX18P25-201ENST00000510539 758 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM38O00635 AC084337.1-201ENST00000524809 686 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM38O00635 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 AC023968.1-201ENST00000560719 475 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC090826.1-203ENST00000569235 490 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC106785.4-201ENST00000569492 412 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM38O00635 AL138895.2-201ENST00000603019 178 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AP004372.1-201ENST00000604842 844 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AL136097.3-201ENST00000611097 505 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM38O00635 RMST_5.1-201ENST00000618704 126 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 MIR6811-201ENST00000620409 58 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC021422.1-201ENST00000621212 473 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 AC006249.1-201ENST00000621223 471 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 AC245100.2-201ENST00000454544 1679 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 AC023245.2-201ENST00000530760 2978 ntBASIC6.35□□□□□ -1.39
TRIM38O00635 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM38O00635 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM38O00635 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM38O00635 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
TRIM38O00635 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM38O00635 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TRIM38O00635 RNU6-40P-201ENST00000384254 107 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 AL157702.1-201ENST00000398764 426 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 DHFRP2-201ENST00000414224 547 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM38O00635 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TRIM38O00635 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 AC046176.1-201ENST00000435260 1170 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 SUMO2P1-206ENST00000445436 284 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 AL157884.3-201ENST00000448273 1184 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 OR2AF1P-201ENST00000454899 889 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 AC018638.3-201ENST00000461273 132 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM38O00635 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM38O00635 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 AC016550.3-201ENST00000515706 767 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 RNA5SP206-201ENST00000516703 121 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM38O00635 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM38O00635 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM38O00635 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM38O00635 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM38O00635 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM38O00635 AC034229.4-201ENST00000607861 441 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 AC016542.1-201ENST00000608259 493 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 MIR6729-201ENST00000618194 65 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 AC005899.7-201ENST00000618199 588 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 MIR6085-201ENST00000618314 110 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 FO681491.1-202ENST00000623392 737 ntBASIC6.34□□□□□ -1.39
TRIM38O00635 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM38O00635 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM38O00635 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM38O00635 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms