Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 RNA5SP477-201ENST00000362639 119 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC245096.1-201ENST00000413104 546 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CDY8P-201ENST00000428380 1279 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 GAPDHP23-201ENST00000444823 993 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CDY20P-201ENST00000447528 1279 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CFL1P4-201ENST00000451536 498 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 OR2AF1P-201ENST00000454899 889 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 RPL7L1P3-201ENST00000455249 689 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 SETP20-201ENST00000457046 852 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC104849.1-201ENST00000462623 405 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC068305.2-201ENST00000550567 1205 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC011270.1-201ENST00000558606 583 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 MIR3189-201ENST00000578735 73 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 RN7SL753P-201ENST00000581238 290 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 NPIPB1P-202ENST00000588786 828 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC100767.2-201ENST00000604840 693 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC096708.4-201ENST00000620563 552 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC022325.1-201ENST00000502748 2199 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AL359091.1-201ENST00000449048 1734 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 RBMY1HP-201ENST00000382759 1389 ntBASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA3F8WFD2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC034229.2-201ENST00000566945 2508 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC092692.1-201ENST00000623625 2595 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC096921.2-201ENST00000561507 1916 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 RNFT1P3-201ENST00000340898 1052 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 HMGA1P8-201ENST00000414130 321 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC117434.1-201ENST00000419971 836 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC073109.1-201ENST00000445066 978 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 FTLP8-201ENST00000446770 267 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 SEPT7P6-201ENST00000469999 1143 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC138409.2-202ENST00000507274 458 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC114781.3-201ENST00000512083 142 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 SETP21-201ENST00000514799 892 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 Y_RNA.667-201ENST00000516212 107 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 RNA5SP271-201ENST00000516700 88 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 IGKV3D-34-201ENST00000522638 302 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 HMGN2P47-201ENST00000559378 272 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 MIR3614-201ENST00000581261 86 ntBASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA3F8WFD2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms