Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC245096.1-201ENST00000413104 546 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 TRIM60P17-201ENST00000415181 719 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 SEC63P1-201ENST00000425785 1258 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 NAP1L4P2-201ENST00000425958 899 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 CDY8P-201ENST00000428380 1279 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 UBE2V1P6-201ENST00000430840 422 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC016908.1-201ENST00000442571 1219 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 GAPDHP23-201ENST00000444823 993 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 CDY20P-201ENST00000447528 1279 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 MTND2P30-201ENST00000456663 382 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC104849.1-201ENST00000462623 405 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 RNA5SP434-201ENST00000516647 121 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 RNA5SP271-201ENST00000516700 88 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC073916.1-201ENST00000545095 130 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC090236.2-201ENST00000587933 1101 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 BNIP3P39-201ENST00000601077 554 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AL355802.4-201ENST00000607635 548 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC096708.4-201ENST00000620563 552 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC097372.4-201ENST00000625025 466 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC129915.3-201ENST00000634128 948 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC011416.1-201ENST00000514947 1732 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AC005618.1-201ENST00000606901 3148 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 DOCK11P1-201ENST00000553480 5932 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 MAPK10-287ENST00000641217 3037 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 PSG10P-201ENST00000501199 1500 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC092724.1-201ENST00000624623 3397 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 OR11H13P-201ENST00000359695 979 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 RNA5SP477-201ENST00000362639 119 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 SNORA43.1-201ENST00000364863 140 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 HSFY7P-201ENST00000432672 318 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AL451136.1-201ENST00000435399 325 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 HSFY8P-201ENST00000437934 318 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 FTLP8-201ENST00000446770 267 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC005077.1-201ENST00000449226 375 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 HSFY5P-201ENST00000453726 309 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 SETP20-201ENST00000457046 852 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 RPL7P51-201ENST00000490532 749 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 RNA5SP400-201ENST00000517155 111 ntBASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.15□□□□□ -1.42
TBC1D3FA6NER0 NPM1P5-201ENST00000557228 838 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms