Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC112492.2-201ENST00000432774 1030 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC023141.3-201ENST00000436698 278 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AL353662.1-201ENST00000439099 327 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AL451063.1-201ENST00000450164 1133 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 MTND6P32-201ENST00000457611 483 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC128716.1-201ENST00000475129 166 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 RN7SL273P-201ENST00000481561 299 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC015864.1-201ENST00000496512 544 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC114781.3-201ENST00000512083 142 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC084337.1-201ENST00000524809 686 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AP000662.1-201ENST00000530952 487 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC090079.2-201ENST00000575289 768 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC015722.2-201ENST00000622210 551 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 MTND5P23-201ENST00000430812 1655 ntBASIC8.62□□□□□ -1.03
USP35Q9P2H5 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
USP35Q9P2H5 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
USP35Q9P2H5 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC010132.2-201ENST00000295493 1043 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 RNA5SP477-201ENST00000362639 119 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 RNA5SP65-201ENST00000363166 119 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC002075.1-201ENST00000457396 676 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 CST12P-201ENST00000457644 362 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC022415.1-202ENST00000486612 523 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC016550.3-201ENST00000515706 767 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 MTND1P36-201ENST00000522384 936 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AL671309.1-201ENST00000603750 544 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 AP004372.1-201ENST00000604842 844 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC005277.2-201ENST00000617898 390 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
USP35Q9P2H5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 AC009779.8-201ENST00000641684 4384 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 TTC41P-205ENST00000551270 3963 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP35Q9P2H5 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 AL512283.1-201ENST00000606756 1384 ntBASIC8.61□□□□□ -1.03
USP35Q9P2H5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC068769.1-201ENST00000474767 2426 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms