Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 RNU1-136P-201ENST00000384181 164 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AL035422.1-201ENST00000414193 397 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 KIF4CP-201ENST00000422742 1279 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AL354766.1-201ENST00000423396 542 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 LINC00328-2P-201ENST00000436585 219 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 MED28P3-201ENST00000444288 531 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 PPIAP7-201ENST00000454070 489 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC099670.1-201ENST00000455141 783 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 RNU1-88P-201ENST00000459274 128 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 GLUD1P3-202ENST00000508551 200 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC021146.10-201ENST00000515628 706 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AP000620.1-201ENST00000527147 504 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 HMGN1P26-201ENST00000558737 303 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 WBP1LP12-201ENST00000604449 331 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC145423.1-201ENST00000605712 336 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC012676.3-201ENST00000614983 479 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 AC007204.1-201ENST00000621794 555 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 MIR6823-201ENST00000622118 61 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 OR11H2-202ENST00000641517 1085 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 LINC02019-201ENST00000608605 2060 ntBASIC5.5□□□□□ -1.53
VAPAQ9P0L0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
VAPAQ9P0L0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC093671.1-201ENST00000624981 2929 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 SELENOWP1-201ENST00000322792 252 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 RN7SKP257-201ENST00000364525 309 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 RNGTTP1-201ENST00000420965 728 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 VN1R21P-201ENST00000426703 765 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC023141.8-201ENST00000442554 208 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 BMS1P10-201ENST00000443754 1120 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC010240.2-201ENST00000445363 1205 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC105384.2-201ENST00000508433 640 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC004232.2-201ENST00000574245 821 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC068768.2-201ENST00000602352 343 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AL135999.3-201ENST00000610501 812 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AC104964.3-201ENST00000606115 2860 ntBASIC5.49□□□□□ -1.53
VAPAQ9P0L0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VAPAQ9P0L0 AL121839.2-201ENST00000565058 6943 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 PSG10P-201ENST00000501199 1500 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms