Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 COX6B1P3-201ENST00000312310 260 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 SELENOWP1-201ENST00000322792 252 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 SNORD1C-201ENST00000363315 78 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 BMS1P10-201ENST00000443754 1120 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC005077.1-201ENST00000449226 375 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 PPIAP27-201ENST00000453800 265 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 GEMIN2P1-201ENST00000454246 752 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 CST12P-201ENST00000457644 362 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC009963.3-201ENST00000458090 486 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 TRBV5-2-201ENST00000489095 273 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC117525.1-201ENST00000515228 503 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 OR4A6P-201ENST00000534364 970 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AL121839.1-201ENST00000556233 1185 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 CYCSP38-201ENST00000559840 322 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AL021918.2-201ENST00000613415 194 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 QRSL1P1-201ENST00000400977 1540 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 MAPK10-261ENST00000641050 3109 ntBASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BLOC1S4Q9NUP1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 NCOA4P2-201ENST00000340589 1813 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 RAB5CP1-201ENST00000395972 580 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC244453.4-201ENST00000419150 388 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 RCC2P2-201ENST00000422174 918 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC099677.3-201ENST00000427081 395 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 LYARP1-201ENST00000436977 1501 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AMYP1-201ENST00000440059 1023 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 RPL6P30-201ENST00000443382 862 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC023194.2-201ENST00000465398 406 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC098847.1-201ENST00000473094 348 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC122718.2-201ENST00000505325 591 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 SNORA70.17-201ENST00000516449 133 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC011853.1-201ENST00000518911 454 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 LINC00556-201ENST00000569603 412 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC005244.1-201ENST00000582566 339 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC008507.3-201ENST00000585753 472 ntBASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms