Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 PCBP2P1-201ENST00000437262 977 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 TUBB4BP6-201ENST00000437576 479 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 EIF5AP4-201ENST00000441206 465 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 RPS7P6-201ENST00000485777 579 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC073610.1-201ENST00000489971 396 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 OR5H7P-201ENST00000514084 930 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 WBP1LP3-201ENST00000523033 208 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AP003396.4-201ENST00000527574 265 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 SCARNA9-201ENST00000530422 353 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC139697.1-201ENST00000548429 745 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC023310.2-201ENST00000553844 547 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC079776.5-201ENST00000641920 211 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 PDZK1P1-202ENST00000425209 1350 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC114774.1-201ENST00000507410 1770 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AL159987.1-201ENST00000347911 293 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 RNA5SP326-201ENST00000363209 110 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 RPL11P3-201ENST00000395256 523 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 NIFKP3-201ENST00000417799 865 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC019205.1-201ENST00000421830 730 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 OR5W1P-201ENST00000423705 938 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC073072.2-201ENST00000447425 348 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 RPSAP37-201ENST00000470913 821 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 RPS17P15-201ENST00000475609 349 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 EIF4E2P2-201ENST00000492033 736 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC091917.2-201ENST00000505002 744 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC025458.1-201ENST00000506046 166 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 GAPDHP71-201ENST00000511530 1003 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 GAPDHP62-201ENST00000515313 990 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC022616.2-201ENST00000523185 300 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC027369.2-201ENST00000528030 440 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC137627.1-201ENST00000545761 289 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC068305.2-201ENST00000550567 1205 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC002310.3-201ENST00000569728 723 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 DHFRP1-201ENST00000579682 559 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 NANOGP3-201ENST00000605855 286 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC009779.8-202ENST00000607990 932 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC244100.4-201ENST00000617747 388 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 Z95114.1-201ENST00000624264 14574 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIX2Q9NPC8 AC015799.1-201ENST00000622996 3122 ntBASIC6.19□□□□□ -1.42
SIX2Q9NPC8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 CAP1P2-201ENST00000417455 1409 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 MTCO1P46-201ENST00000451639 1491 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms