Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AL845552.1-201ENST00000556820 323 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC007346.2-201ENST00000564816 892 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC073333.2-201ENST00000603589 769 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC009237.12-201ENST00000604755 742 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AL133406.3-201ENST00000606817 541 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC096861.1-201ENST00000616652 240 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AP001052.1-201ENST00000626421 99 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC119674.1-202ENST00000641333 1860 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC099535.1-201ENST00000408928 371 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC023141.3-201ENST00000436698 278 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 ZNF619P1-201ENST00000446539 752 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC068491.1-201ENST00000449539 1241 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 RSU1P1-201ENST00000453416 441 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC019084.1-201ENST00000457337 432 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC079080.1-201ENST00000479841 822 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AL133372.1-201ENST00000493565 745 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 RN7SL649P-201ENST00000496974 275 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 Vault.2-201ENST00000516519 98 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC010615.3-201ENST00000597319 394 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 MIR7109-201ENST00000613748 65 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC006213.4-201ENST00000616184 634 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 AC243960.7-201ENST00000623532 707 ntBASIC6.15□□□□□ -1.42
PCDH9Q9HC56 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH9Q9HC56 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 MAPK10-261ENST00000641050 3109 ntBASIC6.15□□□□□ -1.43
PCDH9Q9HC56 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 AL355834.1-201ENST00000556602 3965 ntBASIC6.15□□□□□ -1.43
PCDH9Q9HC56 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
PCDH9Q9HC56 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 HSPD1P9-201ENST00000420325 1636 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AP002512.4-202ENST00000641599 4530 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC140479.2-201ENST00000421567 3130 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 RPL12P12-201ENST00000424633 501 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AL590399.4-201ENST00000436561 601 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AL353662.1-201ENST00000439099 327 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC097463.1-201ENST00000447288 481 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC104164.1-201ENST00000460282 590 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms