Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC007842.1-201ENST00000597336 2039 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 PTCD2P2-201ENST00000415579 1095 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 RPL21P50-201ENST00000417698 477 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 REREP1Y-201ENST00000422655 198 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC112492.2-201ENST00000432774 1030 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 PPIAP10-201ENST00000438675 458 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 REREP2Y-201ENST00000439103 200 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 SOCS5P1-201ENST00000440415 949 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 COX4I1P2-201ENST00000447446 547 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 RPL31P20-201ENST00000449593 360 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AL162739.1-201ENST00000450606 307 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 RPL36AP55-201ENST00000454114 305 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 Z83838.1-202ENST00000456225 839 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC063955.1-201ENST00000462872 685 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC090602.1-201ENST00000469695 252 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AL079303.1-201ENST00000486611 463 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 OR9N1P-201ENST00000491296 333 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 RNA5SP75-201ENST00000516841 111 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 OR7E10P-201ENST00000526420 991 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AP004607.5-201ENST00000532034 217 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AL049779.3-201ENST00000557141 606 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC090953.1-201ENST00000604305 1092 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AL078624.2-201ENST00000605063 554 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC020658.4-201ENST00000613987 684 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC133552.1-201ENST00000569988 4007 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 MIR431-201ENST00000385266 114 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 NFU1P1-201ENST00000413128 774 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 OR52N3P-201ENST00000413417 934 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 MEAF6P1-201ENST00000416092 327 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 EMC3-AS1-205ENST00000438698 534 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AL133351.3-201ENST00000454998 193 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 OSTCP1-201ENST00000455507 450 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 TREML3P-201ENST00000457327 501 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 RPL12P31-201ENST00000478433 450 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 OR11I1P-201ENST00000486033 954 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 TRBV5-2-201ENST00000489095 273 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 OR4D12P-201ENST00000509361 911 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 TOMM22P4-201ENST00000511318 336 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 RNA5SP206-201ENST00000516703 121 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC008555.7-201ENST00000605008 583 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC012213.4-201ENST00000606457 354 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC141002.1-201ENST00000607025 279 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 Z93930.3-201ENST00000607919 749 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC073869.7-201ENST00000640874 297 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms