Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 DUTP1-201ENST00000493631 470 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL049872.1-201ENST00000556323 322 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL391261.1-201ENST00000555712 1479 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC004129.2-201ENST00000457229 287 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC091153.1-201ENST00000466297 402 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 MIR5096-201ENST00000583713 70 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AP000346.3-201ENST00000622821 210 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AL353625.1-202ENST00000366273 571 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 RPS23P9-201ENST00000448848 438 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 GYG1P1-201ENST00000460864 698 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC068138.1-201ENST00000412635 217 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 COX6B1P1-201ENST00000415962 213 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 P2RY10P2-201ENST00000416730 913 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AL035690.1-201ENST00000490892 383 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC096754.1-201ENST00000508904 818 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC069307.1-201ENST00000602820 447 ntBASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC3.87□□□□□ -1.79
ALMS1Q8TCU4 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC093297.3-201ENST00000607056 2517 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC090142.2-201ENST00000483263 416 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC244502.2-201ENST00000543361 851 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 MFSD8-219ENST00000641228 2559 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC232271.1-201ENST00000602455 2715 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms