Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC024589.2-201ENST00000605642 1294 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AL691477.1-201ENST00000624398 162 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC096921.2-201ENST00000561507 1916 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 WDR95P-201ENST00000425638 1542 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 CR788268.1-201ENST00000603931 1809 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AP005435.3-201ENST00000531260 3198 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 OR3A2-201ENST00000408891 1076 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC007386.1-201ENST00000455212 582 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 EIF1P7-201ENST00000487533 337 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 HMGN2P36-201ENST00000529541 409 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 IMMP1LP3-201ENST00000604197 224 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 SDR42E1P1-201ENST00000611327 477 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC092725.2-201ENST00000567658 1389 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RPL11P4-201ENST00000332269 436 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 MIR433-201ENST00000384837 93 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 FABP12P1-201ENST00000401911 322 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 NPM1P22-201ENST00000427761 952 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 GAPDHP58-201ENST00000438477 1006 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 OR4A46P-201ENST00000527255 933 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 PPATP2-201ENST00000605635 508 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC024651.2-201ENST00000562480 2098 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RNA5SP234-201ENST00000363916 119 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RNU6-171P-201ENST00000384354 107 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 BMS1P17-202ENST00000416720 316 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 EIF4A1P7-201ENST00000421800 1220 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 ATP6V1E1P1-201ENST00000439215 681 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 EEF1B2P6-201ENST00000445713 673 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RPSAP37-201ENST00000470913 821 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 UBA52P7-201ENST00000486088 380 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC092865.1-201ENST00000544395 1023 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC027229.1-201ENST00000583887 253 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AL049634.1-201ENST00000453770 1720 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 MAPK10-338ENST00000641647 3362 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 SRRM1P3-201ENST00000426911 2678 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 TNPO1P1-201ENST00000423641 1138 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC114728.1-201ENST00000488289 483 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 DUTP7-201ENST00000507982 486 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC118658.2-201ENST00000618697 459 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 U3.43-201ENST00000410734 213 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 CYP4F29P-201ENST00000420685 446 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AL355433.1-201ENST00000422804 300 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms