Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 RPL12P16-201ENST00000431098 498 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 USP24P1-201ENST00000433802 779 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 ATP5LP2-201ENST00000440646 311 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 RPSAP40-201ENST00000442343 891 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 PPIAP27-201ENST00000453800 265 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC068228.1-201ENST00000461723 211 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 RPL38P3-201ENST00000484463 213 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 RN7SKP238-201ENST00000516483 249 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC006512.2-201ENST00000543250 486 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC008507.3-201ENST00000585753 472 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC090236.2-201ENST00000587933 1101 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC006115.2-201ENST00000596823 202 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AP001267.4-201ENST00000602598 545 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 MIR6780B-201ENST00000610307 79 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 CDY3P-201ENST00000454543 1618 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 CASC19-238ENST00000641523 1558 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 AC005261.6-201ENST00000623072 1387 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC004656.1-201ENST00000568479 4951 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AL096711.1-201ENST00000404780 554 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 RNA5SP431-201ENST00000410312 120 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC092651.1-201ENST00000426110 312 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC007679.3-201ENST00000434035 414 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 TUBB4BP6-201ENST00000437576 479 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 LDHAP1-201ENST00000509421 992 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 MIR2117-201ENST00000516780 80 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 NPM1P42-201ENST00000560329 862 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 TXNP4-201ENST00000575018 310 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC145423.1-201ENST00000605712 336 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AL136131.3-201ENST00000607600 188 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC073592.6-201ENST00000624271 415 ntBASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC65Q8IXS2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms