Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf40Q8IXQ3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf40Q8IXQ3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.47□□□□□ -1.53
C9orf40Q8IXQ3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf40Q8IXQ3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf40Q8IXQ3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf40Q8IXQ3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf40Q8IXQ3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AL096800.1-201ENST00000405326 893 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 RPS3P2-201ENST00000421346 701 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AL365220.1-201ENST00000432923 399 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 RN7SL57P-201ENST00000493687 290 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC145423.1-201ENST00000605712 336 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AL139099.4-201ENST00000614802 114 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AL445670.1-201ENST00000618889 801 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC069234.4-201ENST00000621276 412 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC091305.2-201ENST00000624049 1576 ntBASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf40Q8IXQ3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 PDZK1P1-202ENST00000425209 1350 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 RN7SKP15-201ENST00000364742 309 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 RNU1-59P-201ENST00000364829 162 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 SLC20A1P1-201ENST00000413906 956 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AL035660.1-201ENST00000422041 222 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 IPPKP1-201ENST00000422501 768 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC079807.1-201ENST00000429993 481 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 RPL12P24-201ENST00000474907 486 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AP000648.1-201ENST00000529682 397 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC091078.2-201ENST00000557145 559 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 OR7A8P-201ENST00000595427 913 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 COX6CP7-201ENST00000597056 208 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC027243.2-201ENST00000602530 724 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 RPL12P48-201ENST00000605620 304 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AL031601.1-201ENST00000605702 394 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC015982.1-201ENST00000608113 465 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 U1.25-201ENST00000614085 162 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 U1.34-201ENST00000618578 162 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 U1.31-201ENST00000620022 160 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 SNX18P12-201ENST00000624821 759 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 AC130360.2-201ENST00000533477 1556 ntBASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf40Q8IXQ3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms